RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLC34A1Q06495 639 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ART3Q13508 389 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 LRRC36Q1X8D7 754 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 TMC8Q8IU68 726 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 FBXO39Q8N4B4 442 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 CLDN19Q8N6F1 224 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 STAG3L4Q8TBR4 150 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 CDRT15Q96T59 188 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 BTRCQ9Y297 605 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 A0A1B0GTL3 188 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 LCHNA4D1U4 455 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 UBDO15205 165 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 CLASP2O75122 1294 aaKnown RBP11.71□□□□□ -0.53
VTA1-203ENST00000452973 ECI2O75521 394 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 OLFM2O95897 454 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 PYGLP06737 847 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 SLC26A3P40879 764 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 AGTR2P50052 363 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 HK2P52789 917 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 CTSL3PQ5NE16 218 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ZNF783Q6ZMS7 281 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 DSELQ8IZU8 1212 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 KYQ8NBH2 561 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ACTRT2Q8TDY3 377 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 N4BP2L2Q92802 583 aaPredicted RBP11.71□□□□□ -0.53
VTA1-203ENST00000452973 LINGO1Q96FE5 620 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 C3orf30Q96M34 536 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ATOH8Q96SQ7 321 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 RTKNQ9BST9 563 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ZFYVE1Q9HBF4 777 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 ZBTB26Q9HCK0 441 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 MCM8Q9UJA3 840 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 INTS6Q9UL03 887 aaKnown RBP11.71□□□□□ -0.53
VTA1-203ENST00000452973 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.53
VTA1-203ENST00000452973 PFDN6O15212 129 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 PGLSO95336 258 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 PRAMEF1O95521 474 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 WEE1P30291 646 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 PLEKHG6Q3KR16 790 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 MPPE1Q53F39 396 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 DGKKQ5KSL6 1271 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 LAYNQ6UX15 382 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 LRRC74BQ6ZQY2 392 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.71□□□□□ -0.54
VTA1-203ENST00000452973 OR9I1Q8NGQ6 314 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.54
VTA1-203ENST00000452973 CCDC28BQ9BUN5 200 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 BOCQ9BWV1 1114 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 ASB8Q9H765 288 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 NMRK1Q9NWW6 199 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 IL17CQ9P0M4 197 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 RIMKLBQ9ULI2 386 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 CORO1CQ9ULV4 474 aaPredicted RBP11.71□□□□□ -0.54
VTA1-203ENST00000452973 TIMM22Q9Y584 194 aa11.71□□□□□ -0.54
VTA1-203ENST00000452973 C9JVG2 144 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 NEDD8-MDP1E9PL57 170 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 CRCPO75575 148 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 CDK14O94921 469 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 GLUD1P00367 558 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 CA5AP35218 305 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 MMEL1Q495T6 779 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 AGKQ53H12 422 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 SCIMPQ6UWF3 145 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 CCDC149Q6ZUS6 474 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 TMEM25Q86YD3 366 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 PIH1D2Q8WWB5 315 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 TCF12Q99081 682 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 STX18Q9P2W9 335 aaKnown RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 POMPQ9Y244 141 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 ASB3Q9Y575 518 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 SLC4A7Q9Y6M7 1214 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 CYBBP04839 570 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 LINC00032P0C843 101 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 HOXB8P17481 243 aaPredicted RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 HNF1BP35680 557 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 SUOXP51687 545 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 IL2P60568 153 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 AP2B1P63010 937 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 PTRHD1Q6GMV3 140 aaKnown RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 NECAB2Q7Z6G3 386 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 TSPAN33Q86UF1 283 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 FBXW8Q8N3Y1 598 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 PCDH20Q8N6Y1 951 aaKnown RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 NAT16Q8N8M0 369 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 ST13P5Q8NFI4 369 aaPredicted RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 KIAA1191Q96A73 305 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 L3HYPDHQ96EM0 354 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 LRRC3Q9BY71 257 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 TFB2MQ9H5Q4 396 aaKnown RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 CD274Q9NZQ7 290 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 KIAA1522Q9P206 1035 aaPredicted RBP11.7□□□□□ -0.54
VTA1-203ENST00000452973 DNAJC15Q9Y5T4 150 aa11.7□□□□□ -0.54
VTA1-203ENST00000452973 TRIM16O95361 564 aa11.69□□□□□ -0.54
VTA1-203ENST00000452973 LATS1O95835 1130 aa11.69□□□□□ -0.54
VTA1-203ENST00000452973 FGBP02675 491 aa11.69□□□□□ -0.54
VTA1-203ENST00000452973 ANPEPP15144 967 aa11.69□□□□□ -0.54
VTA1-203ENST00000452973 HLA-FP30511 346 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms