RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NIPA1Q7RTP0 329 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CLHC1Q8NHS4 586 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 LACTBL1A8MY62 500 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 TCF7P36402 384 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 RPS7P62081 194 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 ACOX1Q15067 660 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ILDR2Q71H61 639 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 TFAP2BQ92481 460 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 TADA1Q96BN2 335 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 RTFDC1Q9BY42 306 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 RDH8Q9NYR8 311 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SPHKAPQ2M3C7 1700 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 STX11O75558 287 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 TOP3BO95985 862 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 UBAP2Q5T6F2 1119 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 TRIM48Q8IWZ4 208 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CLIP4Q8N3C7 705 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 FRMD6Q96NE9 622 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 FBXO5Q9UKT4 447 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 NTSR2O95665 410 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 MBL2P11226 248 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 LAMTOR4Q0VGL1 99 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 B3GALNT2Q8NCR0 500 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ATL1Q8WXF7 558 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 XPR1Q9UBH6 696 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ATRNO75882 1429 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CD48P09326 243 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CD72P21854 359 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 PRKCHP24723 683 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 GTF2A2P52657 109 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CLPPQ16740 277 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 IZUMO1Q8IYV9 350 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 PHF10Q8WUB8 498 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 CHRAC1Q9NRG0 131 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ERVK-18Q9QC07 812 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SFMBT1Q9UHJ3 866 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 UNC13AQ9UPW8 1703 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 NUP205Q92621 2012 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 GNG14A0A1W2PPG7 69 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 PTPN1P18031 435 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 DCKP27707 260 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 IFNGR2P38484 337 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 MAPK12P53778 367 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 MAD2L1Q13257 205 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 ZZZ3Q8IYH5 903 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SH3KBP1Q96B97 665 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 DISP2A7MBM2 1401 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ABCA9Q8IUA7 1624 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 OR6C70A6NIJ9 312 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SOCS2O14508 198 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ATF6P18850 670 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 HUNKP57058 714 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 TMEM199Q8N511 208 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SLC35B2Q8TB61 432 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CSPG4P5Q96PW8 444 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 PORCNQ9H237 461 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CPQQ9Y646 472 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 NOMO3P69849 1222 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SNAP47Q5SQN1 464 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ZNF280DQ6N043 979 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 LAPTM4BQ86VI4 370 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CARM1Q86X55 608 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SEZ6LQ9BYH1 1024 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 EIF3KQ9UBQ5 218 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 BTN3A1O00481 513 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 RPS6KA4O75676 772 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 TXNP10599 105 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 SIX1Q15475 284 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 TDRD3Q9H7E2 651 aaKnown RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 AKTIPQ9H8T0 292 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 FARP1Q9Y4F1 1045 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 ITIH5Q86UX2 942 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CCDC36Q8IYA8 594 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ITCHQ96J02 903 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 FEM1CQ96JP0 617 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ZBTB45Q96K62 511 aaPredicted RBP7.84□□□□□ -1.15
SMG1-202ENST00000446231 HSFY1Q96LI6 401 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 COPS4Q9BT78 406 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 AXIN1O15169 862 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 ZNF45Q02386 682 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 GADL1Q6ZQY3 521 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 IGFN1Q86VF2 1251 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 KIF18BQ86Y91 864 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 SPERTQ8NA61 448 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 OR5B17Q8NGF7 314 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 KIFC1Q9BW19 673 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
SMG1-202ENST00000446231 CXCR6O00574 342 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 TSPAN8P19075 237 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 DNAJB2P25686 324 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 DUS1LQ6P1R4 473 aaKnown RBP7.84□□□□□ -1.16
SMG1-202ENST00000446231 COMMD7Q86VX2 200 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 ZDHHC14Q8IZN3 488 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 ADAMTS16Q8TE57 1224 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 FAM193BQ96PV7 902 aaPredicted RBP7.84□□□□□ -1.16
SMG1-202ENST00000446231 RANBP9Q96S59 729 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 DNAJB9Q9UBS3 223 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 A8MU76 341 aa7.84□□□□□ -1.16
SMG1-202ENST00000446231 RENBPP51606 427 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms