RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 MCCC1Q96RQ3 725 aaPredicted RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 COPS8Q99627 209 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 GPR21Q99679 349 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 PBX4Q9BYU1 374 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 BRD9Q9H8M2 597 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 SARS2Q9NP81 518 aaKnown RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 KCTD5Q9NXV2 234 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 OAS3Q9Y6K5 1087 aaKnown RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 OBSL1O75147 1896 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 AURKAO14965 403 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 KERAO60938 352 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 TULP3O75386 442 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 LYPLA1O75608 230 aaPredicted RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 ARHGEF15O94989 841 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 UNC5CO95185 931 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 APODP05090 189 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 CALB2P22676 271 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 SERPINB3P29508 390 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 CDKN2DP55273 166 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 MXRA7P84157 204 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 GALNT1Q10472 559 aaPredicted RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 ZNF460Q14592 562 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ZNF805Q5CZA5 627 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ZNF789Q5FWF6 425 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 FAM46CQ5VWP2 391 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ANKS6Q68DC2 871 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 TMEM184AQ6ZMB5 413 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ADIPOR2Q86V24 386 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 FITM2Q8N6M3 262 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ACVR1CQ8NER5 493 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 GRIN3AQ8TCU5 1115 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 FGF13Q92913 245 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ALPK3Q96L96 1907 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 TRIM54Q9BYV2 358 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 NUDT4Q9NZJ9 180 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 SLCO3A1Q9UIG8 710 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 TNPO3Q9Y5L0 923 aaKnown RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 TSPAN11A1L157 253 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 A8MT66 165 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 EIF3FO00303 357 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 NPC1O15118 1278 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 RAD51BO15315 384 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CLDN7O95471 211 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CBSLP0DN79 551 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ENO3P13929 434 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 CD1DP15813 335 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ALOX15P16050 662 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 IMPDH1P20839 514 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 AKT1P31749 480 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CBSP35520 551 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 EIF2DP41214 584 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 VIPR2P41587 438 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NSG1P42857 185 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NCALDP61601 193 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NFKB2Q00653 900 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NFATC2Q13469 925 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CHRNA6Q15825 494 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 GEN1Q17RS7 908 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 FAM109BQ6ICB4 259 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 PSAPL1Q6NUJ1 521 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CRTC1Q6UUV9 634 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CLNKQ7Z7G1 428 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 GPSM1Q86YR5 675 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 MFSD6LQ8IWD5 586 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NXPE1Q8N323 547 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 MCUR1Q96AQ8 359 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 LINGO1Q96FE5 620 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 GPR78Q96P69 363 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ZCCHC2Q9C0B9 1178 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 CD274Q9NZQ7 290 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 B4GALT6Q9UBX8 382 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TAGLN3Q9UI15 199 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 FAM50BQ9Y247 325 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 DHRS7Q9Y394 339 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 HELZP42694 1942 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 DENND4CQ5VZ89 1909 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CCDC85CA6NKD9 419 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 STX16-NPEPL1H3BU86 382 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PSMD11O00231 422 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 BTN3A1O00481 513 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 KPNA3O00505 521 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 STX16O14662 325 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SLC22A2O15244 555 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ITM2AO43736 263 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 RNASEH1O60930 286 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 GPC4O75487 556 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SUPT7LO94864 414 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 AP2A2O94973 939 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 F7P08709 466 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 NQO1P15559 274 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 BPIP17213 487 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PTPN4P29074 926 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ADSLP30566 484 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 IRX1P78414 480 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 XIAPP98170 497 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SATB1Q01826 763 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PEX6Q13608 980 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SEMA3AQ14563 771 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 MAPRE2Q15555 327 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 DNAL1Q4LDG9 190 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms