RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 OR2AP1Q8NGE2 309 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 AGAP11Q8TF27 550 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 SHC3Q92529 594 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 C8orf76Q96K31 380 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 ZNF514Q96K75 400 aaPredicted RBP10.94□□□□□ -0.66
RTN4-211ENST00000438462 OR2M4Q96R27 311 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 SPON2Q9BUD6 331 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 PCDH12Q9NPG4 1184 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 CNOT8Q9UFF9 292 aaKnown RBP10.94□□□□□ -0.66
RTN4-211ENST00000438462 SLC12A6Q9UHW9 1150 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 PADI2Q9Y2J8 665 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 IKBKBO14920 756 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 ARHGEF9O43307 516 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 CRYABP02511 175 aaKnown RBP10.93□□□□□ -0.66
RTN4-211ENST00000438462 MMP12P39900 470 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
RTN4-211ENST00000438462 CLDN10P78369 228 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 AIMP2Q13155 320 aaKnown RBP10.93□□□□□ -0.66
RTN4-211ENST00000438462 PRAMEF17Q5VTA0 474 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 PNCKQ6P2M8 343 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 LINC00696Q6ZRV3 163 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 SLC9B2Q86UD5 537 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 SPPL2CQ8IUH8 684 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 PARD3BQ8TEW8 1205 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 ISG20Q96AZ6 181 aaKnown RBP10.93□□□□□ -0.66
RTN4-211ENST00000438462 FAM149B1Q96BN6 582 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 AK8Q96MA6 479 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 LRFN5Q96NI6 719 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 ATP13A1Q9HD20 1204 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 PHPT1Q9NRX4 125 aaPredicted RBP10.93□□□□□ -0.66
RTN4-211ENST00000438462 ADGRE2Q9UHX3 823 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 L3MBTL1Q9Y468 752 aa10.93□□□□□ -0.66
RTN4-211ENST00000438462 TGFB1I1O43294 461 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 HTRA2O43464 458 aaPredicted RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 PMPCBO75439 489 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 UBXN7O94888 489 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 POP4O95707 220 aaKnown RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 TRUB2O95900 331 aaKnown RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 CD160O95971 181 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 GSRP00390 522 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 IGLV3-25P01717 112 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 IVLP07476 585 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 SETSIPP0DME0 302 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 RORAP35398 523 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 SNRPD1P62314 119 aaKnown RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 ACY1Q03154 408 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 SLC20A2Q08357 652 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 CYP2A13Q16696 494 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 DOK6Q6PKX4 331 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 CERS6Q6ZMG9 384 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 TFAP2DQ7Z6R9 452 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 SETD3Q86TU7 594 aaPredicted RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 BPHLQ86WA6 291 aaPredicted RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 SYTL1Q8IYJ3 562 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 IMPG2Q9BZV3 1241 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 MIS12Q9H081 205 aa10.92□□□□□ -0.66
RTN4-211ENST00000438462 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
RTN4-211ENST00000438462 CCDC88CQ9P219 2028 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 SYNJ2BP-COX16A0A087WUM0 186 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 IDSB3KWA1 339 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 E9PLN8 166 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 O00370 1275 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 KLF7O75840 302 aaPredicted RBP10.91□□□□□ -0.66
RTN4-211ENST00000438462 AMD1P17707 334 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 GM2AP17900 193 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 IDSP22304 550 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 SUOXP51687 545 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 KRTAP1-1Q07627 177 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 SSPNQ14714 243 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 POLD3Q15054 466 aaPredicted RBP10.91□□□□□ -0.66
RTN4-211ENST00000438462 SEPT7Q16181 437 aaKnown RBP10.91□□□□□ -0.66
RTN4-211ENST00000438462 PTCHD3Q3KNS1 767 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 C5orf22Q49AR2 442 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 IRAK1BP1Q5VVH5 260 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 PRAMEF13Q5VWM6 474 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 PMF1Q6P1K2 205 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 P3H2Q8IVL5 708 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 RSC1A1Q92681 617 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 CLIP3Q96DZ5 547 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 SLC41A2Q96JW4 573 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 VKORC1Q9BQB6 163 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 AMBRA1Q9C0C7 1298 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 KCNJ16Q9NPI9 418 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 COX16Q9P0S2 106 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 SLC17A4Q9Y2C5 497 aa10.91□□□□□ -0.66
RTN4-211ENST00000438462 IGHV5-51A0A0C4DH38 117 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 ADAM10O14672 748 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 KLK8O60259 260 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 RASAL1O95294 804 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 HADHAP40939 763 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 CAPZBP47756 277 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 ARG2P78540 354 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 CDK3Q00526 305 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 PMP22Q01453 160 aa10.9□□□□□ -0.66
RTN4-211ENST00000438462 MFAP5Q13361 173 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms