RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TMEM270Q6UE05 265 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SUSD1Q6UWL2 747 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SCARA5Q6ZMJ2 495 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SATL1Q86VE3 508 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FRMD1Q8N878 549 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 OR6Q1Q8NGQ2 317 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 BLOC1S5Q8TDH9 187 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CD300LFQ8TDQ1 290 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM41AQ96HV5 264 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 MEGF10Q96KG7 1140 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FCRL4Q96PJ5 515 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CYP2S1Q96SQ9 504 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TTLL2Q9BWV7 592 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 B3GNT5Q9BYG0 378 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ZCCHC4Q9H5U6 513 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 AGO3Q9H9G7 860 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 OBP2BQ9NPH6 170 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ADAM22Q9P0K1 906 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 WHRNQ9P202 907 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FOXD3Q9UJU5 478 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FBXW2Q9UKT8 454 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 EIF3LQ9Y262 564 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 USP15Q9Y4E8 981 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PCM1Q15154 2024 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ERVV-2B6SEH9 535 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TGOLN2O43493 480 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 LIPFP07098 398 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 NID1P14543 1247 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 NPR2P20594 1047 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TECP42680 631 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TPMTP51580 245 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SLC5A3P53794 718 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 YWHAGP61981 247 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 IQCCQ4KMZ1 466 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ATAT1Q5SQI0 421 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF385CQ66K41 422 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 DUPD1Q68J44 220 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 OR52E8Q6IFG1 317 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ZFP1Q6P2D0 407 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TECPR1Q7Z6L1 1165 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 DCP2Q8IU60 420 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FAM217AQ8IXS0 508 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 NAGSQ8N159 534 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 EIF1ADQ8N9N8 165 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 OR8J2Q8NGG1 315 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ST8SIA4Q92187 359 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF560Q96MR9 790 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 DSCC1Q9BVC3 393 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 RAB20Q9NX57 234 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 MTCH1Q9NZJ7 389 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 NKX1-2Q9UD57 310 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TJP2Q9UDY2 1190 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FZD10Q9ULW2 581 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF451Q9Y4E5 1061 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PSAT1Q9Y617 370 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 NEDD4P46934 1319 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ATXN2Q99700 1313 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 LGALS16A8MUM7 142 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GSG1L2A8MUP6 293 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 A8MXE2 369 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CLDN4O14493 209 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PLD2O14939 933 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CHRNA1P02708 482 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 C9P02748 559 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SPARCP09486 303 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ATF2P15336 505 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SMSP52788 366 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CHRNDQ07001 517 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 MTMR2Q13614 643 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 VPS26BQ4G0F5 336 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM35AQ53FP2 167 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ERCC6L2Q5T890 1561 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 IRAK1BP1Q5VVH5 260 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SCIMPQ6UWF3 145 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 B3GNT9Q6UX72 402 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 Q6ZNX1 250 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SLC16A13Q7RTY0 426 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GLRX5Q86SX6 157 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ERO1BQ86YB8 467 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 NRROSQ86YC3 692 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 LINC00346Q8IVM7 164 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CFAP206Q8IYR0 622 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 DCP1BQ8IZD4 617 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 RBFAQ8N0V3 343 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 AHI1Q8N157 1196 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 C16orf78Q8WTQ4 265 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FUBP3Q96I24 572 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TECTBQ96PL2 329 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ELOVL1Q9BW60 279 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GRIP2Q9C0E4 1043 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GLOD4Q9HC38 313 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GPRC5CQ9NQ84 441 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FAM217BQ9NTX9 383 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GPN3Q9UHW5 284 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms