RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ASTE1Q2TB18 679 aaPredicted RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 FBXO43Q4G163 708 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 BMP2KLQ5H9B9 411 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 C9orf152Q5JTZ5 239 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 MIIPQ5JXC2 388 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 ERMARDQ5T6L9 678 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 KRT79Q5XKE5 535 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 KRT80Q6KB66 452 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 C11orf88Q6PI97 169 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SASS6Q6UVJ0 657 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 Q6YL49 198 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 RBM44Q6ZP01 1051 aaKnown RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 CCDC186Q7Z3E2 898 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 KDELC2Q7Z4H8 507 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SLFN11Q7Z7L1 901 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 GPAT4Q86UL3 456 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 IGFN1Q86VF2 1251 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 ZDHHC23Q8IYP9 409 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 KIAA2013Q8IYS2 634 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 RNF168Q8IYW5 571 aaPredicted RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SLC44A3Q8N4M1 653 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 GPR150Q8NGU9 434 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 GDPD5Q8WTR4 605 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 TRIB2Q92519 343 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 LPAR1Q92633 364 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 ITFG2Q969R8 447 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 MOAP1Q96BY2 351 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SAT2Q96F10 170 aaPredicted RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 TMEM68Q96MH6 324 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 C8orf49Q96NF6 230 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 WDFY2Q96P53 400 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 FCRL5Q96RD9 977 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 PLEKHF1Q96S99 279 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SEPT5Q99719 369 aaPredicted RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 TIMP4Q99727 224 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 MLST8Q9BVC4 326 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 MRIQ9BWK5 157 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 APOL6Q9BWW8 343 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 HEMGNQ9BXL5 484 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 FRMD8Q9BZ67 464 aaPredicted RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 IKZF4Q9H2S9 585 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 OSGEPL1Q9H4B0 414 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 CYP4F11Q9HBI6 524 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SLC6A13Q9NSD5 602 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 OGFRQ9NZT2 677 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 CGNQ9P2M7 1197 aaKnown RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 FBXL17Q9UF56 701 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 SLC8A2Q9UPR5 921 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 EXO1Q9UQ84 846 aaKnown RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 AAR2Q9Y312 384 aaKnown RBP4.19□□□□□ -1.74
HMGB3-203ENST00000430118 TTC28Q96AY4 2481 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 XIRP2A4UGR9 3374 aa4.19□□□□□ -1.74
HMGB3-203ENST00000430118 OR2A25A4D2G3 310 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 FAM90A8PA6NJQ4 464 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TSPY2A6NKD2 308 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 FAM157AC9JC47 383 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 PI4K2BG5E9Z4 385 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 MSI1O43347 362 aaKnown RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 HS6ST1O60243 411 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TBX10O75333 385 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 SEC31AO94979 1220 aaKnown RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 SRPRAP08240 638 aaKnown RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 FAM90A13PP0C7W8 464 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 FAM90A24PP0C7X0 464 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TSPY3P0CV98 308 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TSPY8P0CW00 308 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 MCM7P33993 719 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 ADRA1BP35368 520 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 GPR12P47775 334 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 CLCNKBP51801 687 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 ZNF41P51814 821 aaPredicted RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 PNLIPRP2P54317 469 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 CCNA1P78396 465 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 HSF1Q00613 529 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TSPY1Q01534 308 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 CEBPZQ03701 1054 aaKnown RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 GALNT3Q14435 633 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 FGFBP1Q14512 234 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 ZNF169Q14929 603 aaPredicted RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 KPNB1Q14974 876 aaKnown RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 ME3Q16798 604 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 CERKLQ49MI3 558 aaPredicted RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 ARL13AQ5H913 290 aaPredicted RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 KIAA1755Q5JYT7 1200 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 SPDYAQ5MJ70 313 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 C9orf50Q5SZB4 431 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 C6orf141Q5SZD1 244 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 PSRC1Q6PGN9 363 aaPredicted RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 LRIG3Q6UXM1 1119 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 SERPINA13PQ6UXR4 307 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 NAPRTQ6XQN6 538 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 RPAINQ86UA6 219 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TBC1D26Q86UD7 250 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 GALNT13Q8IUC8 556 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 EPHX4Q8IUS5 362 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 MCEMP1Q8IX19 187 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 TDRD5Q8NAT2 981 aaKnown RBP4.18□□□□□ -1.74
HMGB3-203ENST00000430118 GPRC5AQ8NFJ5 357 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 OR4N2Q8NGD1 307 aa4.18□□□□□ -1.74
HMGB3-203ENST00000430118 CAGE1Q8TC20 777 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms