RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PIM1P11309 404 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 PKMP14618 531 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 TARSP26639 723 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 IGFALSP35858 605 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CRATP43155 626 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 DRG2P55039 364 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 ARPINQ7Z6K5 226 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 KYQ8NBH2 561 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 FAM237BA0A1B0GVD1 139 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 LRRC14BA6NHZ5 514 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 UPK3BL1B0FP48 263 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 B4DGG1 531 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 UPK3BL2E5RIL1 263 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 TEX28O15482 410 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CSTF2P33240 577 aaKnown RBP eCLIP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 BUD31P41223 144 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 RPL14P50914 215 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 FAM98BQ52LJ0 330 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 MS4A13Q5J8X5 152 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 LUZP2Q86TE4 346 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 TRIM69Q86WT6 500 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF567Q8N184 647 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 C3orf14Q9HBI5 128 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 MTRRQ9UBK8 725 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 OR2AP1Q8NGE2 309 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 PTGER3P43115 390 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 NRLP54845 237 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 TAF5Q15542 800 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 FBXL22Q6P050 247 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 LRRTM4Q86VH4 590 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 SCAIQ8N9R8 606 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 FIG4Q92562 907 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 CCDC134Q9H6E4 229 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 WDR6Q9NNW5 1121 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 ZDHHC7Q9NXF8 308 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 DICER1Q9UPY3 1922 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 CCT8L1PA6NM43 557 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 COCHO43405 550 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF30P17039 623 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 ABCG1P45844 678 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 KCNQ1P51787 676 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 MANFP55145 182 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 MINDY4Q4G0A6 757 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 Q6ZVU0 165 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 GATAD2AQ86YP4 633 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 POMGNT2Q8NAT1 580 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 GRIA2P42262 883 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 CAPRIN2Q6IMN6 1127 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PIWIL4Q7Z3Z4 852 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 MPP5Q8N3R9 675 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 C2orf73Q8N5S3 287 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PRELID2Q8N945 189 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 NELL1Q92832 810 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 ADI1Q9BV57 179 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 MRPS30Q9NP92 439 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 GDE1Q9NZC3 331 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 HCN3Q9P1Z3 774 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 NOCTQ9UK39 431 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 KLF8O95600 359 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 UNGP13051 313 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF24P17028 368 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 LBPP18428 481 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 CPSF6Q16630 551 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 MYLK3Q32MK0 819 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 SLC39A4Q6P5W5 647 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 KIAA0408Q6ZU52 694 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 TCAF1Q9Y4C2 921 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 RFPL2O75678 378 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 VIPR1P32241 457 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 RPP38P78345 283 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PRKG2Q13237 762 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 TRIM40Q6P9F5 258 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 CNPPD1Q9BV87 410 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PSMD13Q9UNM6 376 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 HS3ST4Q9Y661 456 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 RNF225M0QZC1 329 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 GJB5O95377 273 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 VAC14Q08AM6 782 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PWP1Q13610 501 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 IYDQ6PHW0 289 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 DPP10Q8N608 796 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 ACTRT2Q8TDY3 377 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 TCF12Q99081 682 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 TRIM4Q9C037 500 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PTPRHQ9HD43 1115 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 INTS10Q9NVR2 710 aaKnown RBP10.68□□□□□ -0.7
PTCH1-206ENST00000421141 MIOSQ9NXC5 875 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 TAGLN3Q9UI15 199 aa10.68□□□□□ -0.7
PTCH1-206ENST00000421141 KNL1Q8NG31 2342 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CPA2P48052 419 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 TRAF2Q12933 501 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 HECTD2Q5U5R9 776 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SYPL2Q5VXT5 272 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 APTXQ7Z2E3 356 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 EID3Q8N140 333 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SPATA22Q8NHS9 363 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SLC35F5Q8WV83 523 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 EIF2B3Q9NR50 452 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms