RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 CYB5D2Q8WUJ1 264 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 UCMAQ8WVF2 138 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 KCTD4Q8WVF5 259 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 ECHDC3Q96DC8 303 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 SCRN2Q96FV2 425 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 LRIG1Q96JA1 1093 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 MRGPRX3Q96LB0 322 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 C7orf26Q96N11 449 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 KLHL32Q96NJ5 620 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 SMIM14Q96QK8 99 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 LYSMD1Q96S90 227 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 NDNQ99608 321 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 MRPL57Q9BQC6 102 aaKnown RBP6.61□□□□□ -1.35
HDAC8-211ENST00000415409 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 MECRQ9BV79 373 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 OSBPL1AQ9BXW6 950 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 TRIM55Q9BYV6 548 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 EBF3Q9H4W6 596 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF576Q9H609 170 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 ECT2Q9H8V3 914 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 BPIFA1Q9NP55 256 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 THAP1Q9NVV9 213 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 ELOVL2Q9NXB9 296 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-211ENST00000415409 COPG2Q9UBF2 871 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 EMCNQ9ULC0 261 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
HDAC8-211ENST00000415409 CRYL1Q9Y2S2 319 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 PPIL1Q9Y3C6 166 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 COMMD10Q9Y6G5 202 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 LAMA3Q16787 3333 aa6.61□□□□□ -1.35
HDAC8-211ENST00000415409 GLYATL1P3A0A0U1RQE8 302 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 TBC1D3BA6NDS4 549 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CCT8L1PA6NM43 557 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 F8W8V4 182 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 TRIM24O15164 1050 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 TRIM13O60858 407 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 VPS26AO75436 327 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ECI2O75521 394 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 RHOBTB1O94844 696 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CLDN7O95471 211 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 PYGLP06737 847 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CCDC166P0CW27 439 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 RALBP11234 206 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF30P17039 623 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 FDXRP22570 491 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 FCARP24071 287 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 FMO4P31512 558 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SPAM1P38567 509 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CDKN2DP55273 166 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 KDSRQ06136 332 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 FCHO2Q0JRZ9 810 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 BST1Q10588 318 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SF3A3Q12874 501 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 RUNX3Q13761 415 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ARHGEF7Q14155 803 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 PCLAFQ15004 111 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SETDB1Q15047 1291 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ACAP2Q15057 778 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 GPR33Q49SQ1 333 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 RBM20Q5T481 1227 aaKnown RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 TMEM215Q68D42 235 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CRTC1Q6UUV9 634 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 VITQ6UXI7 678 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ZYG11AQ6WRX3 759 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SNX20Q7Z614 316 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 YTHDF3Q7Z739 585 aaKnown RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 C10orf107Q8IVU9 208 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CEP97Q8IW35 865 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ETFBKMTQ8IXQ9 262 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 PLD6Q8N2A8 252 aaKnown RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 BEND7Q8N7W2 519 aaPredicted RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CHST14Q8NCH0 376 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 GRIN3AQ8TCU5 1115 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF398Q8TD17 642 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 FRS2Q8WU20 508 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 HEXDCQ8WVB3 486 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SORCS1Q8WY21 1168 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 LPGAT1Q92604 370 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 PBXIP1Q96AQ6 731 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ELSPBP1Q96BH3 223 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 NXNL1Q96CM4 212 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ZFYVE19Q96K21 471 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 MCCC1Q96RQ3 725 aaPredicted RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 MYADMQ96S97 322 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 OLFM1Q99784 485 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 AARSD1Q9BTE6 412 aaKnown RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 C1QTNF1Q9BXJ1 281 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 GRIP2Q9C0E4 1043 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 MRPL46Q9H2W6 279 aaKnown RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 BRD9Q9H8M2 597 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SYTL2Q9HCH5 934 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 SLCO1B3Q9NPD5 702 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 TAS2R13Q9NYV9 303 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 CPSF2Q9P2I0 782 aaKnown RBP6.6□□□□□ -1.35
HDAC8-211ENST00000415409 DKK3Q9UBP4 350 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms