RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CBSLP0DN79 551 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 UROSP10746 265 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 PRPS2P11908 318 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 CBSP35520 551 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 CASP12Q6UXS9 341 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 GPR141Q7Z602 305 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-205ENST00000414879 MYH6P13533 1939 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 EDDM13A0A1B0GTR0 161 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 FGF18O76093 207 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 AKT2P31751 481 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 PSMD8P48556 350 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 PLIN5Q00G26 463 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 USP4Q13107 963 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 ALG11Q2TAA5 492 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 DLK2Q6UY11 383 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 SLC2A13Q96QE2 648 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 TDP1Q9NUW8 608 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 MAGEL2Q9UJ55 1249 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 DOCK2Q92608 1830 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 KDELR3O43731 214 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 PEX11AO75192 247 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 STBD1O95210 358 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 MT-CO1P00395 513 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 FAM58BPP0C7Q3 252 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 TTKP33981 857 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 NUMBP49757 651 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 RELL1Q8IUW5 271 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 CNTD1Q8N815 330 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
PTPRF-205ENST00000414879 PGAP2Q9UHJ9 254 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 V9GYQ6 96 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 MYH13Q9UKX3 1938 aa11.91□□□□□ -0.5
PTPRF-205ENST00000414879 C9IYK1 514 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 PLIN3O60664 434 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 RNASEH2AO75792 299 aaKnown RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 IQCF3P0C7M6 154 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 COPZ1P61923 177 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 DLG2Q15700 870 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 INO80DQ53TQ3 878 aaPredicted RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 SERPINA9Q86WD7 417 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 OR2AP1Q8NGE2 309 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 PAWRQ96IZ0 340 aaKnown RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ZNF607Q96SK3 696 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 HERC2P3Q9BVR0 1158 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 SOHLH2Q9NX45 425 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 PLK2Q9NYY3 685 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 NDOR1Q9UHB4 597 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 PI15O43692 258 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 BANF1O75531 89 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 CMPK1P30085 196 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 SUOXP51687 545 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 RPL38P63173 70 aaKnown RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 TJAP1Q5JTD0 557 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 CNSTQ6PJW8 725 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 SLC51AQ86UW1 340 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ARNTL2Q8WYA1 636 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 SLC2A11Q9BYW1 496 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 CACNA2D2Q9NY47 1150 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 PRKAG3Q9UGI9 489 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 TRPS1Q9UHF7 1281 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ZNF711Q9Y462 761 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 FPGTO14772 594 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 OAZ2O95190 189 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 GOT2P00505 430 aaKnown RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ADH5P11766 374 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ABCG1P45844 678 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 GLB1L3Q8NCI6 653 aaPredicted RBP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 TTLQ8NG68 377 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 BPIFB1Q8TDL5 484 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 GPR21Q99679 349 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 TBC1D23Q9NUY8 699 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ADGRE2Q9UHX3 823 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 PHF24Q9UPV7 400 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 SLC9A8Q9Y2E8 581 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 ZNF780BQ9Y6R6 833 aa11.9□□□□□ -0.5
PTPRF-205ENST00000414879 A0A1W2PPM1 405 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 VIPP01282 170 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 ACRP10323 421 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 SOX6P35712 828 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 HNMTP50135 292 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 AP1S2P56377 157 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 OASLQ15646 514 aaKnown RBP11.9□□□□□ -0.51
PTPRF-205ENST00000414879 CA9Q16790 459 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 DPY19L1Q2PZI1 675 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 FAM92BQ6ZTR7 304 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 CMC1Q7Z7K0 106 aa11.9□□□□□ -0.51
PTPRF-205ENST00000414879 DHRSXQ8N5I4 330 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms