RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 POLD2P49005 469 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 PFKPQ01813 784 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 DLG1Q12959 904 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 PDK4Q16654 411 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 ATP13A5Q4VNC0 1218 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 TMEM196Q5HYL7 178 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 RNF187Q5TA31 235 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 SDE2Q6IQ49 451 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 KYAT3Q6YP21 454 aaKnown RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 FAM47EQ6ZV65 393 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 CLEC14AQ86T13 490 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 TBC1D1Q86TI0 1168 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 LRRC34Q8IZ02 419 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 CENPLQ8N0S6 344 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 CBARPQ8N350 705 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 LRRC8CQ8TDW0 803 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 NXNL1Q96CM4 212 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 TSPAN17Q96FV3 270 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 SLC6A17Q9H1V8 727 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-204ENST00000409727 ANKRD6Q9Y2G4 727 aa12.38□□□□□ -0.43
CHMP3-204ENST00000409727 A0A087X1B8 175 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 PLIN3O60664 434 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 RNASEH1O60930 286 aaKnown RBP12.37□□□□□ -0.43
CHMP3-204ENST00000409727 NIPSNAP2O75323 286 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 DHRS4L1P0CG22 281 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CCDC166P0CW27 439 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 TAC1P20366 129 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 BGNP21810 368 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 FDXRP22570 491 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 ACRV1P26436 265 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 NTSR1P30989 418 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 P2RY2P41231 377 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 LIG3P49916 1009 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CSRP3P50461 194 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 TIAL1Q01085 375 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP3-204ENST00000409727 SATB1Q01826 763 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CNTN1Q12860 1018 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 ENPP2Q13822 863 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CTSL3PQ5NE16 218 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 LIPIQ6XZB0 460 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 ERN2Q76MJ5 926 aaKnown RBP12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CPLX4Q7Z7G2 160 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 IL17RCQ8NAC3 791 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 TXNDC5Q8NBS9 432 aaKnown RBP12.37□□□□□ -0.43
CHMP3-204ENST00000409727 DNASE1L2Q92874 299 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 BIRC8Q96P09 236 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF317Q96PQ6 595 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 FAM83DQ9H4H8 585 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 CCDC134Q9H6E4 229 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 NMRAL1Q9HBL8 299 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 SARS2Q9NP81 518 aaKnown RBP12.37□□□□□ -0.43
CHMP3-204ENST00000409727 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 FGFR1OP2Q9NVK5 253 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
CHMP3-204ENST00000409727 COL4A2P08572 1712 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 E5RI56 91 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 TK2O00142 265 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 NDUFAB1O14561 156 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 MMP20O60882 483 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ADAM23O75077 832 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PROCP04070 461 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PKMP14618 531 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ITGB6P18564 788 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CHRM3P20309 590 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PTGER3P43115 390 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CAMK2GQ13555 558 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CST6Q15828 149 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 INSCQ1MX18 579 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 LEXMQ3ZCV2 418 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 FAM46CQ5VWP2 391 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 NUDCD3Q8IVD9 361 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 AADATQ8N5Z0 425 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CLDN19Q8N6F1 224 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 GANCQ8TET4 914 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ANKRD49Q8WVL7 239 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF75CPQ92670 426 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PLEKHG4BQ96PX9 1271 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 TTC1Q99614 292 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 RIOK2Q9BVS4 552 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 C1QTNF1Q9BXJ1 281 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CLPBQ9H078 707 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 RSPH9Q9H1X1 276 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 GALPQ9UBC7 116 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 NDRG2Q9UN36 371 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PRSS21Q9Y6M0 314 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 MYO10Q9HD67 2058 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 F5P12259 2224 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 A0A1W2PP55 124 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 NPC1O15118 1278 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 GSTA1P08263 222 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms