RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZC3H10Q96K80 434 aaKnown RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 HHIPQ96QV1 700 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 CCDC28BQ9BUN5 200 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 POLR1EQ9GZS1 481 aaKnown RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 DUSP15Q9H1R2 295 aaPredicted RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 MAGEH1Q9H213 219 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 MRPL46Q9H2W6 279 aaKnown RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 EML4Q9HC35 981 aaKnown RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 NT5MQ9NPB1 228 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC17A6Q9P2U8 582 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 MARCOQ9UEW3 520 aaPredicted RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 MCM8Q9UJA3 840 aa12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC9A3R1O14745 358 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 HDAC3O15379 428 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 HYAL3O43820 417 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 GREM1O60565 184 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 PEX11AO75192 247 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 PENKP01210 267 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 IGLV3-27P01718 113 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 KLKB1P03952 638 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 THRAP10827 490 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 CEACAM1P13688 526 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 NAA20P61599 178 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 OLIG2Q13516 323 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF235Q14590 738 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 RFTN1Q14699 578 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ITPRIPL2Q3MIP1 535 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 C5orf22Q49AR2 442 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 FAM182AQ5T1J6 154 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 SEL1L3Q68CR1 1132 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 LRRC8EQ6NSJ5 796 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ESRP1Q6NXG1 681 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 C19orf48Q6RUI8 117 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 EPGNQ6UW88 154 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ARHGAP36Q6ZRI8 547 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 PIWIL4Q7Z3Z4 852 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 DENND1CQ8IV53 801 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 KIAA1958Q8N8K9 716 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 OSCP1Q8WVF1 389 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ATXN7L3BQ96GX2 97 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 FEM1CQ96JP0 617 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 CNDP1Q96KN2 507 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 SORT1Q99523 831 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 LINC00597Q9H2U6 94 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 DENND2DQ9H6A0 471 aaPredicted RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 GPAMQ9HCL2 828 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 TMEM9BQ9NQ34 198 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 DUS2Q9NX74 493 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 TBC1D14Q9P2M4 693 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF212Q9UDV6 495 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 WASF3Q9UPY6 502 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF510Q9Y2H8 683 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 NYNRINQ9P2P1 1898 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
SMARCB1-203ENST00000407082 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 AKAP13Q12802 2813 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 A8MUI8 341 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 LYPLA1O75608 230 aaPredicted RBP12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 PRKCGP05129 697 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 TPBGLP0DKB5 382 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 TACR2P21452 398 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 ATP5F1P24539 256 aaPredicted RBP12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 OR1E1P30953 314 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 VHLP40337 213 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 AP2B1P63010 937 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 PRAMEP78395 509 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 SERINC3Q13530 473 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 CNGA3Q16281 694 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF470Q6ECI4 717 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 FAM45BPQ6NSW5 357 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 MRNIPQ6NTE8 343 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 FBXL22Q6P050 247 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 AAGABQ6PD74 315 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 Q6ZNB5 142 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 SDCCAG8Q86SQ7 713 aaPredicted RBP12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 BBS7Q8IWZ6 715 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 ADGRG2Q8IZP9 1017 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 FAM45AQ8TCE6 357 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 JADE3Q92613 823 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 HMCESQ96FZ2 354 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 SERPINI1Q99574 410 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 MIPEPQ99797 713 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms