RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PELI3Q8N2H9 469 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 MAFAQ8NHW3 353 aaPredicted RBP15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 FATE1Q969F0 183 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 SPATA16Q9BXB7 569 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 OBP2AQ9NY56 170 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 GTSE1Q9NYZ3 720 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 LSM7Q9UK45 103 aaKnown RBP15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 PACSIN3Q9UKS6 424 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 RAB26Q9ULW5 256 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 SH3BP1Q9Y3L3 701 aa15.9■□□□□ 0.14
CHRFAM7A-203ENST00000401522 NUP205Q92621 2012 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CAPN8A6NHC0 703 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 E9PAM4 449 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ACSL4O60488 711 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MOCS2O96007 188 aaPredicted RBP15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RBP1P09455 135 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PKNOX1P55347 436 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SQLEQ14534 574 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MS4A13Q5J8X5 152 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SPATA6LQ8N4H0 392 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 BHLHE22Q8NFJ8 381 aaPredicted RBP15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RIN3Q8TB24 985 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NCSTNQ92542 709 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MARK4Q96L34 752 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MRPL1Q9BYD6 325 aaKnown RBP15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ATP13A1Q9HD20 1204 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 EPS15L1Q9UBC2 864 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 IPO11Q9UI26 975 aaKnown RBP15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RIMS3Q9UJD0 308 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HS3ST4Q9Y661 456 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 DOCK8Q8NF50 2099 aa15.89■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TMEM233B4DJY2 109 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TRIM38O00635 465 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PAPSS2O95340 614 aaPredicted RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LTA4HP09960 611 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PABPC4LP0CB38 370 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FCARP24071 287 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 VIPR2P41587 438 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CHRNA4P43681 627 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LEPRP48357 1165 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HSPA13P48723 471 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SULT2A1Q06520 285 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 STX5Q13190 355 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SMAD2Q15796 467 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SLC14A2Q15849 920 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CNPY1Q3B7I2 92 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PIK3R6Q5UE93 754 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FBXL19Q6PCT2 694 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CNSTQ6PJW8 725 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SGF29Q96ES7 293 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LRRC3BQ96PB8 259 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MEAF6Q9HAF1 191 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ZFP14Q9HCL3 533 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HACD3Q9P035 362 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NDUFA13Q9P0J0 144 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 C15orf38-AP3S2A0A0A6YYH1 394 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PRSS51A0A1B0GVH4 220 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 IPO13O94829 963 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CAPNS1P04632 268 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 DPP6P42658 865 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PSMD8P48556 350 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SERPINH1P50454 418 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RENBPP51606 427 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MS4A2Q01362 244 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 GALNT1Q10472 559 aaPredicted RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ILF2Q12905 390 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CSHL1Q14406 222 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RBM20Q5T481 1227 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NADSYN1Q6IA69 706 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ARPINQ7Z6K5 226 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TICAM1Q8IUC6 712 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SLC22A9Q8IVM8 553 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FAM217AQ8IXS0 508 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PRUNE2Q8WUY3 3088 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RSPRY1Q96DX4 576 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 IMP4Q96G21 291 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 VPS45Q9NRW7 570 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NDFIP2Q9NV92 336 aa15.88■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SMIM31A0A1B0GVY4 71 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 A8MT66 165 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ACOT8O14734 319 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 GSTT1P30711 240 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PTK2BQ14289 1009 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ACAP2Q15057 778 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TLR1Q15399 786 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TANGO2Q6ICL3 276 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TMA16Q96EY4 203 aaKnown RBP15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NPAS2Q99743 824 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 OLFM1Q99784 485 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TRMOQ9BU70 441 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PHF7Q9BWX1 381 aaPredicted RBP15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 UNKQ9C0B0 810 aaKnown RBP15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 EPB41L1Q9H4G0 881 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TBC1D14Q9P2M4 693 aa15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SUCOQ9UBS9 1254 aaKnown RBP15.87■□□□□ 0.13
CHRFAM7A-203ENST00000401522 DNAJA2O60884 412 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PENKP01210 267 aaPredicted RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HNRNPLP14866 589 aaKnown RBP eCLIP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms