RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 C2orf27AQ580R0 203 aa17.08■□□□□ 0.33
MCF2L-203ENST00000375604 ZFP1Q6P2D0 407 aa17.08■□□□□ 0.33
MCF2L-203ENST00000375604 NPAS4Q8IUM7 802 aa17.08■□□□□ 0.33
MCF2L-203ENST00000375604 LIN7AO14910 233 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 OR1F1O43749 312 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 INTS11Q5TA45 600 aaKnown RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 VITQ6UXI7 678 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 C17orf64Q86WR6 236 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 FBXW8Q8N3Y1 598 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 INPP4AQ96PE3 977 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 CEP44Q9C0F1 390 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 INTS7Q9NVH2 962 aaKnown RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 COPG2Q9UBF2 871 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 G3V2T6 193 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 PSMD9O00233 223 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 JAK1P23458 1154 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 C2orf80Q0P641 193 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 CA9Q16790 459 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 VPS26BQ4G0F5 336 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 NET1Q7Z628 596 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF567Q8N184 647 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 PLD5Q8N7P1 536 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 SAR1AQ9NR31 198 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 DERAQ9Y315 318 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 SESN1Q9Y6P5 492 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 MYO5BQ9ULV0 1848 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 A0A0G2JN53 185 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 MAPKAPK2P49137 400 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 PTCHD4Q6ZW05 846 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 HID1Q8IV36 788 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 XAGE5Q8WWM1 108 aa17.08■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF184Q99676 751 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-203ENST00000375604 SPAM1P38567 509 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PCBP1Q15365 356 aaKnown RBP eCLIP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 ALG11Q2TAA5 492 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 KIAA0408Q6ZU52 694 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GSTCDQ8NEC7 633 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 TEX47Q8TBZ9 253 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 FAM110BQ8TC76 370 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 DNASE1L2Q92874 299 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 AP2M1Q96CW1 435 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GAL3ST4Q96RP7 486 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GBA3Q9H227 469 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 RASSF1Q9NS23 344 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 OR5F1O95221 314 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 FADS2O95864 444 aaKnown RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PAX7P23759 505 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PTDSS1P48651 473 aaKnown RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PGDP52209 483 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GRM3Q14832 879 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 NDUFAF6Q330K2 333 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PERM1Q5SV97 790 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 CPTPQ5TA50 214 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 TXNDC11Q6PKC3 985 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GALNT13Q8IUC8 556 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 NEK7Q8TDX7 302 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 ARMC5Q96C12 935 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 C19orf60Q96EN9 201 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 ART5Q96L15 291 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 FCRL4Q96PJ5 515 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 SLC7A2P52569 658 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GDF10P55107 478 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 BMT2Q1RMZ1 405 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 CTU1Q7Z7A3 348 aaKnown RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 QKIQ96PU8 341 aaKnown RBP eCLIP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 TRIM38O00635 465 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 RECQL5O94762 991 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 MFN2O95140 757 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PTPN9P43378 593 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 GNPDA1P46926 289 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 CAPN13Q6MZZ7 669 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 CHSY3Q70JA7 882 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 ADGRG6Q86SQ4 1221 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 NUAK2Q9H093 628 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 SLC35C2Q9NQQ7 365 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 LRCH4O75427 683 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 TCEA3O75764 348 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 MED26O95402 600 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 CSKP41240 450 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 LILRA4P59901 499 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PPIDQ08752 370 aaKnown RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 PARP15Q460N3 678 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 HDDC3Q8N4P3 179 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 DBF4BQ8NFT6 615 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
MCF2L-203ENST00000375604 SUCOQ9UBS9 1254 aaKnown RBP17.07■□□□□ 0.32
MCF2L-203ENST00000375604 KCNU1A8MYU2 1149 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 FAM25EA8MYX2 175 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 FSCN2O14926 492 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 CTSOP43234 321 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 PDK4Q16654 411 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 ARMCX6Q7L4S7 300 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SERPINA9Q86WD7 417 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms