RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 GMPPBQ9Y5P6 360 aa8.21□□□□□ -1.09
GARNL3-201ENST00000373386 HMX3A6NHT5 357 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 RNASEH1O60930 286 aaKnown RBP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 SNNO75324 88 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 CSDE1O75534 798 aaKnown RBP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 MYO1DO94832 1006 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 APOC1P02654 83 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 LGALS2P05162 132 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 ETV5P41161 510 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 RNF144AP50876 292 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 RENBPP51606 427 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 CDH8P55286 799 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 BCAR1P56945 870 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 TSPAN5P62079 268 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 SELENBP1Q13228 472 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 MED21Q13503 144 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 AGAP7PQ5VUJ5 663 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 IL31Q6EBC2 164 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 ZYG11AQ6WRX3 759 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 ZDHHC12Q96GR4 267 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 CDK5RAP1Q96SZ6 601 aaKnown RBP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 MECRQ9BV79 373 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 MRPS26Q9BYN8 205 aaKnown RBP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.21□□□□□ -1.1
GARNL3-201ENST00000373386 RPS6KA6Q9UK32 745 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 PCDHA11Q9Y5I1 949 aa8.21□□□□□ -1.1
GARNL3-201ENST00000373386 RBBP9O75884 186 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 PGK2P07205 417 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 INSRRP14616 1297 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 AOC1P19801 751 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 NR4A1P22736 598 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 TPTEP56180 551 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 CARD18P57730 90 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 UBE2IP63279 158 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 XIAPP98170 497 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 HNRNPDQ14103 355 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 HIC1Q14526 733 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 HSF5Q4G112 596 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 FSCBQ5H9T9 825 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ASPGQ86U10 573 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 TMEM192Q8IY95 271 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 CRYBG2Q8N1P7 616 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 SRFBP1Q8NEF9 429 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 OR52N1Q8NH53 320 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ZFP28Q8NHY6 868 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 PCDH19Q8TAB3 1148 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 LRRC20Q8TCA0 184 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 METTL6Q8TCB7 284 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 MCOLN3Q8TDD5 553 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 HSFY1Q96LI6 401 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 RILPQ96NA2 401 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 EBNA1BP2Q99848 306 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 GORASP2Q9H8Y8 452 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ZDHHC7Q9NXF8 308 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 PADI4Q9UM07 663 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 TRPV2Q9Y5S1 764 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 POLR2AP24928 1970 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 CCDC195A0A1B0GUA6 201 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 SLC15A5A6NIM6 579 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 F8W036 122 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 TXNDC9O14530 226 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 RFPL1O75677 317 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 KRT8P05787 483 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 BPGMP07738 259 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ITIH1P19827 911 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 CLCN3P51790 818 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ELOAQ14241 798 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 VEPH1Q14D04 833 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 CYP2A13Q16696 494 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 NADK2Q4G0N4 442 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 BRMS1LQ5PSV4 323 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 TAPT1Q6NXT6 567 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ERICH5Q6P6B1 374 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ALKAL1Q6UXT8 129 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 GADL1Q6ZQY3 521 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 EEPD1Q7L9B9 569 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 Q8N9G6 341 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 LPCAT1Q8NF37 534 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ADCY4Q8NFM4 1077 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 FBXO27Q8NI29 283 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 JADE3Q92613 823 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ZNF641Q96N77 438 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 RC3H2Q9HBD1 1191 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 RSL24D1Q9UHA3 163 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 TSR3Q9UJK0 312 aaKnown RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 LRFN2Q9ULH4 789 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 DMRT1Q9Y5R6 373 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 PTCH2Q9Y6C5 1203 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 NRCAMQ92823 1304 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 DCAF8L1A6NGE4 600 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 SDR42E2A6NKP2 422 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 PRR5-ARHGAP8B1AHC4 643 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 CDC123O75794 336 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-201ENST00000373386 SCGB1D2O95969 90 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 ASGR1P07306 291 aa8.2□□□□□ -1.1
GARNL3-201ENST00000373386 SLC2A3P11169 496 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms