RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 A8MX80 341 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 NARSO43776 548 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 ASMTLO95671 621 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 C1SP09871 688 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 BPIP17213 487 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 SAT1P21673 171 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 LHCGRP22888 699 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CRABP2P29373 138 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 PPARGP37231 505 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 SUOXP51687 545 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 WDR4P57081 412 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 RAB10P61026 200 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 XIAPP98170 497 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 ENPP2Q13822 863 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 FBXO43Q4G163 708 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 LRRC73Q5JTD7 316 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 RBM20Q5T481 1227 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 FAM46CQ5VWP2 391 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 SDE2Q6IQ49 451 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 FAM151BQ6UXP7 276 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 KYAT3Q6YP21 454 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CERS6Q6ZMG9 384 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 RAPH1Q70E73 1250 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 DPPA4Q7L190 304 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CCDC91Q7Z6B0 441 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 TTC7BQ86TV6 843 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 LCA5Q86VQ0 697 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 UBALD2Q8IYN6 164 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CKAP2Q8WWK9 683 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 EID2BQ96D98 161 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 FAM111AQ96PZ2 611 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CCDC68Q9H2F9 335 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 CAB39LQ9H9S4 337 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 PRSS16Q9NQE7 514 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 RAD18Q9NS91 495 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC17A7Q9P2U7 560 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 PPM1HQ9ULR3 514 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 FASNP49327 2511 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 A0A087X1B8 175 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 UBA6A0AVT1 1052 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PHGDHO43175 533 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 SRP72O76094 671 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PRAMEF1O95521 474 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 IL1BP01584 269 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 C2P06681 752 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 COL6A2P12110 1019 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 MMP12P39900 470 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 CSRP3P50461 194 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PRKCQQ04759 706 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 ELP6Q0PNE2 266 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 ZKSCAN8Q15776 578 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 POM121L1PQ3SYA9 428 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF789Q5FWF6 425 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 HECTD2Q5U5R9 776 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 LYPLAL1Q5VWZ2 237 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PSAPL1Q6NUJ1 521 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 FBXL19Q6PCT2 694 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 TXNDC11Q6PKC3 985 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 SNX20Q7Z614 316 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM3CQ92520 227 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 LPGAT1Q92604 370 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 ARRDC3Q96B67 414 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 MAGEB18Q96M61 343 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PLEKHG4BQ96PX9 1271 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM129BQ96TA1 746 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 ACOX2Q99424 681 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 NDNQ99608 321 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 OMDQ99983 421 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 FBRSL1Q9HCM7 1045 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 HCN2Q9UL51 889 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PIKFYVEQ9Y2I7 2098 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 CRYL1Q9Y2S2 319 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 PLLPQ9Y342 182 aa13.77□□□□□ -0.21
PDLIM5-203ENST00000359265 K7EQS6 105 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 PSMD11O00231 422 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 GAPDHSO14556 408 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 RNASEH1O60930 286 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 DHRS4L1P0CG22 281 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 SLC35E2BP0CK96 405 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 PRSS56P0CW18 603 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 TIE1P35590 1138 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 ETV4P43268 484 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 PSMD8P48556 350 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 SPINT3P49223 89 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 KPNA2P52292 529 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 SEC13P55735 322 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 TAS2R39P59534 338 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 DCDC1P59894 354 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 MRPS21P82921 87 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 SEMG2Q02383 582 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 RALGDSQ12967 914 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 CAMK2GQ13555 558 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms