RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CEP97Q8IW35 865 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 GPATCH11Q8N954 259 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 ZNF398Q8TD17 642 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 DYDC1Q8WWB3 177 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 SCAMP4Q969E2 229 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 ELMO2Q96JJ3 720 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 CABS1Q96KC9 395 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 COQ10AQ96MF6 247 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 OLFM1Q99784 485 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 C12orf65Q9H3J6 166 aaKnown RBP18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 FBRSQ9HAH7 460 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 MLXIPLQ9NP71 852 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 PLLPQ9Y342 182 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 MTF2Q9Y483 593 aaPredicted RBP18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 DOCK9Q9BZ29 2069 aa18.04■□□□□ 0.48
SMARCD3-202ENST00000356800 A0A1W2PP55 124 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 GMNCA6NCL1 334 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 PSMD11O00231 422 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 OR1I1O60431 355 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 NDUFS3O75489 264 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 MPOP05164 745 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 SAT1P21673 171 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 TTPAP49638 278 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 DCDC1P59894 354 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 PRKCQQ04759 706 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 DBN1Q16643 649 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 HSF5Q4G112 596 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 ATP13A5Q4VNC0 1218 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 AARS2Q5JTZ9 985 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 ZDHHC20Q5W0Z9 365 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 LVRNQ6Q4G3 990 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 SERPINA9Q86WD7 417 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 HDDC3Q8N4P3 179 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 RAB7BQ96AH8 199 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 SLC13A1Q9BZW2 595 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 IQCGQ9H095 443 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 FAM83DQ9H4H8 585 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 NFKBIL1Q9UBC1 381 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 TMPRSS11EQ9UL52 423 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 MMP17Q9ULZ9 603 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 COQ6Q9Y2Z9 468 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 NUMA1Q14980 2115 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 TRPM6Q9BX84 2022 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 MMP20O60882 483 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 DHRS4L1P0CG22 281 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 C7P10643 843 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 TARSP26639 723 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 CDKN2DP55273 166 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 TIAL1Q01085 375 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 ZNF460Q14592 562 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 ACOX1Q15067 660 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 ZKSCAN8Q15776 578 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 SEPT7Q16181 437 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 INSCQ1MX18 579 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 EOGTQ5NDL2 527 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 HECTD2Q5U5R9 776 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 FAM131CQ96AQ9 280 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 MAGEB18Q96M61 343 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 BIRC8Q96P09 236 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 ZNF317Q96PQ6 595 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 SLC17A7Q9P2U7 560 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 WNT16Q9UBV4 365 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 DCDC2Q9UHG0 476 aa18.03■□□□□ 0.48
SMARCD3-202ENST00000356800 PIKFYVEQ9Y2I7 2098 aa18.02■□□□□ 0.48
SMARCD3-202ENST00000356800 UBA6A0AVT1 1052 aaPredicted RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 RGSL1A5PLK6 1076 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 PHGDHO43175 533 aaKnown RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 C2P06681 752 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 C6P13671 934 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 ACRV1P26436 265 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 POU4F1Q01851 419 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 FZD5Q13467 585 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 GPR33Q49SQ1 333 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 HENMT1Q5T8I9 393 aaKnown RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 RNF187Q5TA31 235 aaPredicted RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 HHATQ5VTY9 493 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 CERS6Q6ZMG9 384 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 TAX1BP1Q86VP1 789 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 NXPE1Q8N323 547 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 GDAP1Q8TB36 358 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 DTD2Q96FN9 168 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 CHMP6Q96FZ7 201 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 AARSD1Q9BTE6 412 aaKnown RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 RIOK2Q9BVS4 552 aaKnown RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 ABCG8Q9H221 673 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 GRID1Q9ULK0 1009 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 CORO1CQ9ULV4 474 aaPredicted RBP18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 VWA7Q9Y334 891 aa18.02■□□□□ 0.47
SMARCD3-202ENST00000356800 A0A096LPK6 155 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 NEMP1O14524 444 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 WNT9AO14904 365 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 AP1G1O43747 822 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 GLRA3O75311 464 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 RNASEH2AO75792 299 aaKnown RBP18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 SLC35E2BP0CK96 405 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 FMO4P31512 558 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 SEC24CP53992 1094 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 STARD6P59095 220 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms