RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 PKMP14618 531 aaKnown RBP13.49□□□□□ -0.25
CDC42-202ENST00000344548 TTPAP49638 278 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 CACNG1Q06432 222 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
CDC42-202ENST00000344548 PDAP1Q13442 181 aaKnown RBP13.49□□□□□ -0.25
CDC42-202ENST00000344548 TUBB3Q13509 450 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 ACAP2Q15057 778 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 FBXO48Q5FWF7 155 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 PHTF2Q8N3S3 785 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 RDH11Q8TC12 318 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 ZNF398Q8TD17 642 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 ZNF641Q96N77 438 aaPredicted RBP13.49□□□□□ -0.25
CDC42-202ENST00000344548 POMKQ9H5K3 350 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 FBRSL1Q9HCM7 1045 aaKnown RBP13.49□□□□□ -0.25
CDC42-202ENST00000344548 TMPRSS11EQ9UL52 423 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 ANKRD12Q6UB98 2062 aa13.49□□□□□ -0.25
CDC42-202ENST00000344548 LRRC14BA6NHZ5 514 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 CBX6O95503 412 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TSPAN12O95859 305 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 JUNP05412 331 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 MTHFD2P13995 350 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TIMP2P16035 220 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 OPRD1P41143 372 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 NCALDP61601 193 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ADAM15Q13444 863 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 CLNKQ7Z7G1 428 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 CCNYL1Q8N7R7 359 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 CD200R1Q8TD46 325 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 EXT2Q93063 718 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 NMUR2Q9GZQ4 415 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 DRC3Q9H069 523 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ZFP14Q9HCL3 533 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ARMCX1Q9P291 453 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ZDHHC2Q9UIJ5 367 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ZNF106Q9H2Y7 1883 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 GLYATL1P3A0A0U1RQE8 302 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TMEM233B4DJY2 109 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 CDC7O00311 574 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 PLK4O00444 970 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 NFATC1O95644 943 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 HSPA4LO95757 839 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 HNRNPLP14866 589 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDC42-202ENST00000344548 ITGB6P18564 788 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TSPAN8P19075 237 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TARSP26639 723 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 FCHO2Q0JRZ9 810 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ATP13A5Q4VNC0 1218 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TRIM67Q6ZTA4 783 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 USP45Q70EL2 814 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ZNF557Q8N988 423 aaPredicted RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 SCG3Q8WXD2 468 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 ACOX2Q99424 681 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 PLCD4Q9BRC7 762 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 SARS2Q9NP81 518 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 KCNK4Q9NYG8 393 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TAS2R13Q9NYV9 303 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 DEC1Q9P2X7 70 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 CORO1CQ9ULV4 474 aaPredicted RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 ITM2BQ9Y287 266 aa13.48□□□□□ -0.25
CDC42-202ENST00000344548 OAS3Q9Y6K5 1087 aaKnown RBP13.48□□□□□ -0.25
CDC42-202ENST00000344548 TRBV5-4A0A0C4DH59 114 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 ATP5BP06576 529 aaKnown RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 RECQLP46063 649 aaPredicted RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 RAD51Q06609 339 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 HSD11B1LQ7Z5J1 315 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 SNX20Q7Z614 316 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 WDR75Q8IWA0 830 aaKnown RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 CPNE9Q8IYJ1 553 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 TDHQ8IZJ6 230 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 OSBPL1AQ9BXW6 950 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 PCDH12Q9NPG4 1184 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 IL36AQ9UHA7 158 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 ATG2BQ96BY7 2078 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 PIKFYVEQ9Y2I7 2098 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 UBXN8O00124 270 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 PPP6CO00743 305 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 CHRM3P20309 590 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 ATP5F1P24539 256 aaPredicted RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 GJA4P35212 333 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 LTBRP36941 435 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 SPAM1P38567 509 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 NNMTP40261 264 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 SLC26A3P40879 764 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 PTGER3P43115 390 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 SOX9P48436 509 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 IDH3AP50213 366 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 CLCN7P51798 805 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 CCDC15Q0P6D6 951 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 TSNQ15631 228 aaKnown RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms