RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 DDI1Q8WTU0 396 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 PEX13Q92968 403 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 BHMTQ93088 406 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 NUDCD1Q96RS6 583 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 UBL7Q96S82 380 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 RBBP8Q99708 897 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 FAM167BQ9BTA0 163 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 IQCGQ9H095 443 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 TREX1Q9NSU2 369 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 VPS28Q9UK41 221 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 OR51B4Q9Y5P0 310 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 SLCO1B1Q9Y6L6 691 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 ERICH4A6NGS2 130 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 GOLGA8RI6L899 631 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 COPEO14579 308 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 INSIG1O15503 277 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 TNFSF14O43557 240 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 TIMM44O43615 452 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 RFPL1O75677 317 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 TMCC1O94876 653 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 NDST3O95803 873 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 ITGA2BP08514 1039 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 PYGBP11216 843 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 DRD4P21917 467 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 MZF1P28698 734 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 CSKP41240 450 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 LIMK2P53671 638 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 SLC12A1Q13621 1099 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 SEPT6Q14141 434 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 ZNF234Q14588 700 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 SUZ12Q15022 739 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 CYTH1Q15438 398 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 UGP2Q16851 508 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 FSCBQ5H9T9 825 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 SIRPB2Q5JXA9 342 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 MROH9Q5TGP6 573 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 LVRNQ6Q4G3 990 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 RGS9BPQ6ZS82 235 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 FIBINQ8TAL6 211 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 GDAP1Q8TB36 358 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 TCP10LQ8TDR4 215 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 UCMAQ8WVF2 138 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 ISL2Q96A47 359 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 ALG14Q96F25 216 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 C2orf49Q9BVC5 232 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 VPS51Q9UID3 782 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 RIMKLBQ9ULI2 386 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 PSAT1Q9Y617 370 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 GOLGA4Q13439 2230 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 NUMA1Q14980 2115 aa13.47□□□□□ -0.25
HERPUD1-202ENST00000344114 CABIN1Q9Y6J0 2220 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 HMX2A2RU54 273 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 TK2O00142 265 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 SIN3BO75182 1162 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 ACADMP11310 421 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 HADHAP40939 763 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 CSNK1EP49674 416 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 SERPINB8P50452 374 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 AFF3P51826 1226 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 PLK1P53350 603 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 IHHQ14623 411 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 EIF4HQ15056 248 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 E2F5Q15329 346 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 PDK4Q16654 411 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 KDELC2Q7Z4H8 507 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 STRA8Q7Z7C7 330 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 CPLX4Q7Z7G2 160 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 CALML6Q8TD86 181 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 TRIB3Q96RU7 358 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 MLXIPLQ9NP71 852 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 IARS2Q9NSE4 1012 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 IL1RAPL1Q9NZN1 696 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 SLC17A6Q9P2U8 582 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 LHX3Q9UBR4 397 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 SNX11Q9Y5W9 270 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 ANKRD12Q6UB98 2062 aa13.46□□□□□ -0.25
HERPUD1-202ENST00000344114 HELZ2Q9BYK8 2649 aaKnown RBP13.46□□□□□ -0.26
HERPUD1-202ENST00000344114 LRRK1Q38SD2 2015 aa13.46□□□□□ -0.26
HERPUD1-202ENST00000344114 BPTFQ12830 3046 aa13.46□□□□□ -0.26
HERPUD1-202ENST00000344114 PLXNA2O75051 1894 aa13.46□□□□□ -0.26
HERPUD1-202ENST00000344114 FAM149AA5PLN7 773 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 SNAP91O60641 907 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GLRA3O75311 464 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 C1QL1O75973 258 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 CD160O95971 181 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 VIMP08670 466 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GRK6P43250 576 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 MAGEA12P43365 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms