RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TMEM39AQ9NV64 488 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 GALPQ9UBC7 116 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 SCOCQ9UIL1 159 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 ATP11BQ9Y2G3 1177 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 DNAJC15Q9Y5T4 150 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 OBSL1O75147 1896 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 H7C0S8 307 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 FZD6O60353 706 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 CLASP2O75122 1294 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 VPS26AO75436 327 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 RAG1P15918 1043 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 XRCC1P18887 633 aaPredicted RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 CEACAM7Q14002 265 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 CTSL3PQ5NE16 218 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 ITIH5Q86UX2 942 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 FBXO39Q8N4B4 442 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 NKAPQ8N5F7 415 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 DCAF4L2Q8NA75 395 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 ALG14Q96F25 216 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 C3orf30Q96M34 536 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 SLC30A3Q99726 388 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 MRPL17Q9NRX2 175 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 DNMT3BQ9UBC3 853 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 ADAMTS6Q9UKP5 1117 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 ABHD14A-ACY1A0A1B0GW23 586 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 H3BNX3 289 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 STX16-NPEPL1H3BU86 382 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 CDC7O00311 574 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 TEX28O15482 410 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 NIPSNAP2O75323 286 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 ECI2O75521 394 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 SPATA31D3P0C874 917 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 HTRA3P83110 453 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 CDC16Q13042 620 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 STX5Q13190 355 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 GEN1Q17RS7 908 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 PABPC1LQ4VXU2 614 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 AGKQ53H12 422 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 SPATA31D4Q6ZUB0 917 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 ECSITQ9BQ95 431 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 UTP6Q9NYH9 597 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 CCDC167Q9P0B6 97 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 NPEPPSL1A6NEC2 478 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 SYCE1LA8MT33 242 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 AZIN1O14977 448 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 EEF1DP29692 281 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 CLCN4P51793 760 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 RPS6KA3P51812 740 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 FOXA1P55317 472 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 FLOT2Q14254 428 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 AARS2Q5JTZ9 985 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 RNF148Q8N7C7 305 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 SIDT2Q8NBJ9 832 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 TRPC4APQ8TEL6 797 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 FUBP1Q96AE4 644 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 TM6SF2Q9BZW4 377 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 FBRSL1Q9HCM7 1045 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 IL17CQ9P0M4 197 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 TRMT6Q9UJA5 497 aaKnown RBP17.29■□□□□ 0.36
DDX28-201ENST00000332395 PKP3Q9Y446 797 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 ZNF711Q9Y462 761 aa17.29■□□□□ 0.36
DDX28-201ENST00000332395 K7ERQ8 282 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 BTN3A1O00481 513 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 PRAMEF12O95522 483 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 CD9P21926 228 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 ME2P23368 584 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 CLCQ05315 142 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 MMEL1Q495T6 779 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 C1orf53Q5VUE5 145 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 KANK2Q63ZY3 851 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 FAM217AQ8IXS0 508 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 CMTR2Q8IYT2 770 aaKnown RBP17.28■□□□□ 0.36
DDX28-201ENST00000332395 PHC3Q8NDX5 983 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 TWIST2Q8WVJ9 160 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 GPR39O43194 453 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 TSPAN12O95859 305 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 CTPS1P17812 591 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 GABRR2P28476 465 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 RFC2P35250 354 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 MSX2P35548 267 aaPredicted RBP17.28■□□□□ 0.36
DDX28-201ENST00000332395 ATP4BP51164 291 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 AP1S1P61966 158 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 XIAPP98170 497 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 CYP4F8P98187 520 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 LCP2Q13094 533 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 REP15Q6BDI9 236 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 TAS2R42Q7RTR8 314 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 LYSMD3Q7Z3D4 306 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 APCDD1Q8J025 514 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 SNX31Q8N9S9 440 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 CD200R1Q8TD46 325 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 DIS3LQ8TF46 1054 aaKnown RBP17.28■□□□□ 0.36
DDX28-201ENST00000332395 KCNJ9Q92806 393 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 EID2BQ96D98 161 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 MYO19Q96H55 970 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 KCNA7Q96RP8 456 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 GPR63Q9BZJ6 419 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 AKTIPQ9H8T0 292 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 MAGEE1Q9HCI5 957 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms