RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 DNAJC14Q6Y2X3 702 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 CCDC149Q6ZUS6 474 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 FAM217AQ8IXS0 508 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 KYQ8NBH2 561 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 HIPK4Q8NE63 616 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 KIAA1191Q96A73 305 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MYO19Q96H55 970 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 RSRC1Q96IZ7 334 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 FAR2Q96K12 515 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 NSUN5Q96P11 429 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 GCNAQ96QF7 691 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TTC1Q99614 292 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 HCFC1R1Q9NWW0 138 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 IL17CQ9P0M4 197 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 IKZF3Q9UKT9 509 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CCL26Q9Y258 94 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 VPS9D1Q9Y2B5 631 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ZNF711Q9Y462 761 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 SLC30A1Q9Y6M5 507 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CHD5Q8TDI0 1954 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 SUPT3HB4E1H0 165 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 LEFTY2O00292 366 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 BTN3A1O00481 513 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 KIAA0355O15063 1070 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CFLARO15519 480 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 VPS26AO75436 327 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 SUPT3HO75486 399 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 GPC4O75487 556 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PENKP01210 267 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 LINC00271P0C7V0 271 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PSMA3P25788 255 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 CCR2P41597 374 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ERVFC1P60507 584 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 XIAPP98170 497 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 NFKB2Q00653 900 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TAF11Q15544 211 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PGM2L1Q6PCE3 622 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 FAM151BQ6UXP7 276 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 DSELQ8IZU8 1212 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TRPC4APQ8TEL6 797 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 EEF1AKMT1Q8WVE0 214 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 PIH1D2Q8WWB5 315 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 NRG4Q8WWG1 115 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 USP13Q92995 863 aaPredicted RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 RCN3Q96D15 328 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ZNF570Q96NI8 536 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 DERL2Q9GZP9 239 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ZNF385DQ9H6B1 395 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MEAF6Q9HAF1 191 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ZFYVE1Q9HBF4 777 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MAGEE1Q9HCI5 957 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MID1IP1Q9NPA3 183 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 ASAH2Q9NR71 780 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 MCM8Q9UJA3 840 aa7.53□□□□□ -1.2
IFT88-201ENST00000319980 TRMT6Q9UJA5 497 aaKnown RBP7.53□□□□□ -1.2
IFT88-201ENST00000319980 C1orf232A0A0U1RR37 186 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 HIDE1A8MVS5 230 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 H7C0S8 307 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 UBDO15205 165 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CCNT2O60583 730 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 KERAO60938 352 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CLASP2O75122 1294 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 RFPL2O75678 378 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 BAIAP3O94812 1187 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CDK14O94921 469 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 BAG2O95816 211 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 ENO3P13929 434 aaPredicted RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 ADSLP30566 484 aaPredicted RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 SATB1Q01826 763 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 PLEKHG6Q3KR16 790 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 CTSL3PQ5NE16 218 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 MPP7Q5T2T1 576 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 GPR65Q8IYL9 337 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CLYBLQ8N0X4 340 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 FBXW8Q8N3Y1 598 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CPXM2Q8N436 756 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 FBXO39Q8N4B4 442 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 FIBINQ8TAL6 211 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 SLC26A7Q8TE54 656 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 FUBP1Q96AE4 644 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 ABCB8Q9NUT2 735 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CCDC167Q9P0B6 97 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CXXC1Q9P0U4 656 aaPredicted RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 TSR3Q9UJK0 312 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 INTS6Q9UL03 887 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 POMPQ9Y244 141 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 ZNF510Q9Y2H8 683 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 DNAJC15Q9Y5T4 150 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 OAS3Q9Y6K5 1087 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 PRRC2BQ5JSZ5 2229 aaKnown RBP7.52□□□□□ -1.21
IFT88-201ENST00000319980 LTBP2Q14767 1821 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 NPEPPSL1A6NEC2 478 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 GOLGA8CPA6NN73 597 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 SLC22A2O15244 555 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 ECI2O75521 394 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 CLDN7O95471 211 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 PRAMEF1O95521 474 aa7.52□□□□□ -1.21
IFT88-201ENST00000319980 GLUD1P00367 558 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms