RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CCSAPQ6IQ19 270 aaPredicted RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CPSF7Q8N684 471 aaKnown RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 PMM1Q92871 262 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 C11orf24Q96F05 449 aaPredicted RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 PHF12Q96QT6 1004 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 B3GNT5Q9BYG0 378 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 FAM172BPA6NC97 362 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 MAFO75444 373 aaPredicted RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 SLC35G4P0C7Q5 338 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 ITPKBP27987 946 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 RAVER1Q8IY67 606 aaKnown RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 RBFAQ8N0V3 343 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 NXNL1Q96CM4 212 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 FAM163AQ96GL9 167 aaPredicted RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 APOLD1Q96LR9 279 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 TBC1D24Q9ULP9 559 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 REXO2Q9Y3B8 237 aaKnown RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 MEIS2O14770 477 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CXCR3P49682 368 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 PCDH1Q08174 1060 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 FAAH2Q6GMR7 532 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CLNKQ7Z7G1 428 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 TMPRSS11BQ86T26 416 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 NAT16Q8N8M0 369 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 PCDHB18PQ96TA0 734 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 HMX1Q9NP08 348 aaPredicted RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 ASAH2Q9NR71 780 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CCDC59Q9P031 241 aaKnown RBP17.92■□□□□ 0.46
COL5A3-201ENST00000264828 E7ENX8 843 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 C1QTNF3-AMACRE9PGA6 284 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 RGS10O43665 173 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CABYRO75952 493 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 IFNGP01579 166 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 FAM124AQ86V42 546 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 TWIST2Q8WVJ9 160 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 CEP295NLQ96MC4 621 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF304Q9HCX3 659 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 MAP4K5Q9Y4K4 846 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 KCNE2Q9Y6J6 123 aa17.92■□□□□ 0.46
COL5A3-201ENST00000264828 RBMXL2O75526 392 aaKnown RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 LDB1Q86U70 411 aaPredicted RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 TCAIMQ8N3R3 496 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 TCF25Q9BQ70 676 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF180Q9UJW8 692 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 FAM240BA0A1B0GVZ2 78 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 IQCF5A8MTL0 148 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 PAGE1O75459 146 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 S100A6P06703 90 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 FKBP1CQ5VVH2 108 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 CLIP4Q8N3C7 705 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 HJURPQ8NCD3 748 aaPredicted RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 FCRL2Q96LA5 508 aaPredicted RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 SLC4A9Q96Q91 983 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 C3P01024 1663 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ERN1O75460 977 aaKnown RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 FABP3P05413 133 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 MAPK8P45983 427 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 SNAPC1Q16533 368 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ARMCX6Q7L4S7 300 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 JAZF1Q86VZ6 243 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ECHDC2Q86YB7 292 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 MYO19Q96H55 970 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 FEM1CQ96JP0 617 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 KCNS3Q9BQ31 491 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 NRCAMQ92823 1304 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 DHX15O43143 795 aaKnown RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ARHGDIBP52566 201 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ARFIP1P53367 373 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 TARBP2Q15633 366 aaKnown RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 UBE2J2Q8N2K1 259 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 TRPV1Q8NER1 839 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 DIRAS2Q96HU8 199 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 SEMA3GQ9NS98 782 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 OSER1Q9NX31 292 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 IKZF2Q9UKS7 526 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF214Q9UL59 606 aaPredicted RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 FFAR2O15552 330 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 DHFRP00374 187 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 C15orf52Q6ZUT6 534 aaKnown RBP17.91■□□□□ 0.46
COL5A3-201ENST00000264828 DCBLD1Q8N8Z6 715 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 ADCY4Q8NFM4 1077 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 LPGAT1Q92604 370 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 DNAJC28Q9NX36 388 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 PFDN2Q9UHV9 154 aa17.91■□□□□ 0.46
COL5A3-201ENST00000264828 S100GP29377 79 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 CBX2Q14781 532 aaPredicted RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 AHSA2Q719I0 299 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 THAP5Q7Z6K1 395 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 IMP3Q9NV31 184 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SYNPO2Q9UMS6 1093 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 KDM4FA0A1W2PPD8 638 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF432O94892 652 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 FGF1P05230 155 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 AZGP1P25311 298 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 MNDAP41218 407 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 MXD1Q05195 221 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 GPR158Q5T848 1215 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 BICRALQ6AI39 1079 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms