RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TCAF1Q9Y4C2 921 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 WNT6Q9Y6F9 365 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 LTBP3Q9NS15 1303 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 AP3D1O14617 1153 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 CLPTM1O96005 669 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 FAM58BPP0C7Q3 252 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 NT5EP21589 574 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 GNPDA1P46926 289 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 CPT1BQ92523 772 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 NTPCRQ9BSD7 190 aaKnown RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 GMEB2Q9UKD1 530 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF132P52740 706 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 RALGDSQ12967 914 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 LRRC74BQ6ZQY2 392 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 EXOC3L1Q86VI1 746 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 SIDT2Q8NBJ9 832 aaKnown RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ASB3Q9Y575 518 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 OR1F1O43749 312 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 STK16O75716 305 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 TM7SF2O76062 418 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ADH5P11766 374 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF24P17028 368 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 HTR7P34969 479 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 MAGEA10P43363 369 aaPredicted RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 FAM182AQ5T1J6 154 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ANKRD22Q5VYY1 191 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 DHRSXQ8N5I4 330 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 SERHL2Q9H4I8 314 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 C3orf14Q9HBI5 128 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 SERHLQ9NQF3 203 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 RPS6KA6Q9UK32 745 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 MPSTP25325 297 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 CMPK1P30085 196 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 PBX1P40424 430 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 SLC20A2Q08357 652 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 PDGFRLQ15198 375 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 CPTPQ5TA50 214 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 MSANTD2Q6P1R3 559 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ALYREFQ86V81 257 aaKnown RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 DEFB119Q8N690 84 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ATP6V1C2Q8NEY4 427 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 EXOSC8Q96B26 276 aaKnown RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 VPS35Q96QK1 796 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 MCCC1Q96RQ3 725 aaPredicted RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 C9orf16Q9BUW7 83 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 MCM8Q9UJA3 840 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 COQ6Q9Y2Z9 468 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ATXN2Q99700 1313 aaKnown RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 INPPL1O15357 1258 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 MATN4O95460 622 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 AQP1P29972 269 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 GRM2Q14416 872 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ARCQ7LC44 396 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 SETD9Q8NE22 299 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 PHF10Q8WUB8 498 aaKnown RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ITCHQ96J02 903 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 POLR3BQ9NW08 1133 aaPredicted RBP18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ALKBH4Q9NXW9 302 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 PDP2Q9P2J9 529 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 FBXW2Q9UKT8 454 aa18.36■□□□□ 0.53
CLIP2-201ENST00000223398 ATP6V1G2O95670 118 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 NDUFA9Q16795 377 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 CDC73Q6P1J9 531 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 STK32AQ8WU08 396 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 IPCEF1Q8WWN9 437 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 RCN3Q96D15 328 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 FNDC11Q9BVV2 318 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 GPR88Q9GZN0 384 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 HDHD2Q9H0R4 259 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 PIPSLA2A3N6 862 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 DHX15O43143 795 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 TEAD2Q15562 447 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 NPY5RQ15761 445 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 CARD16Q5EG05 197 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 MBLAC2Q68D91 279 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 SPESP1Q6UW49 350 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 CERS6Q6ZMG9 384 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 RELTQ969Z4 430 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 GTPBP2Q9BX10 602 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 NOL11Q9H8H0 719 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 SUCOQ9UBS9 1254 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 NOCTQ9UK39 431 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 MCIDASD6RGH6 385 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 OR10H3O60404 316 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 KCNQ1P51787 676 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 DRG2P55039 364 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 NAA20P61599 178 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 SLC34A1Q06495 639 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 FASTKD3Q14CZ7 662 aaKnown RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 TRIM40Q6P9F5 258 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 C12orf66Q96MD2 445 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 CCDC177Q9NQR7 707 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 ARL5AQ9Y689 179 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 SIN3BO75182 1162 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 ATP12AP54707 1039 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 ENPP7Q6UWV6 458 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 NAPRTQ6XQN6 538 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 UXS1Q8NBZ7 420 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms