RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ARPC2O15144 300 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 NCK1P16333 377 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 PRDX3P30048 256 aaKnown RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 INTS11Q5TA45 600 aaKnown RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 MRPL10Q7Z7H8 261 aaKnown RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 GABPB2Q8TAK5 448 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 TADA1Q96BN2 335 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 FBXL20Q96IG2 436 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 SEMA4BQ9NPR2 832 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 CDC14AQ9UNH5 594 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 USP22Q9UPT9 525 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 PCDHA9Q9Y5H5 950 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 RNF103-CHMP3A0A140T963 221 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 ASPDHA6ND91 283 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 MAGEB3O15480 346 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 GLP2RO95838 553 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 CD52P31358 61 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 CCT8P50990 548 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 ADARP55265 1226 aaKnown RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 GALNT3Q14435 633 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 SETMARQ53H47 684 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 TTC33Q6PID6 262 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 BLOC1S3Q6QNY0 202 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 CLVS1Q8IUQ0 354 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 TEX26Q8N6G2 289 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 MYEOVQ96EZ4 313 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 SEMA3CQ99985 751 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 ZYG11BQ9C0D3 744 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-233ENST00000642021 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.22e-10■□□□□ 9.2
PHGDH-233ENST00000642021 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 FOXD2O60548 495 aaPredicted RBP13.77□□□□□ -0.2
PHGDH-233ENST00000642021 MT-ND1P03886 318 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 GFAPP14136 432 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 RHOQP17081 205 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 MYF6P23409 242 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 FASP25445 335 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 ACVRL1P37023 503 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 TSPY1Q01534 308 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 LPIN1Q14693 890 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 SLC36A3Q495N2 470 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 SLC39A12Q504Y0 691 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 PAGE3Q5JUK9 113 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 FBXL22Q6P050 247 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 SCIMPQ6UWF3 145 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 CXCL17Q6UXB2 119 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 GPR152Q8TDT2 470 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 HSPBAP1Q96EW2 488 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.2
PHGDH-233ENST00000642021 ARPC5LQ9BPX5 153 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 RHBDL2Q9NX52 303 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 ABI2Q9NYB9 513 aaPredicted RBP13.77□□□□□ -0.2
PHGDH-233ENST00000642021 TLR6Q9Y2C9 796 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 MED16Q9Y2X0 877 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 GPR45Q9Y5Y3 372 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 ACTL7AQ9Y615 435 aa13.77□□□□□ -0.2
PHGDH-233ENST00000642021 TRIM64CA6NLI5 447 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 INPP4BO15327 924 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 B4GALT3O60512 393 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 LBPP18428 481 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 IL10P22301 178 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.21
PHGDH-233ENST00000642021 EEF1DP29692 281 aaKnown RBP13.77□□□□□ -0.21
PHGDH-233ENST00000642021 ZFP36L2P47974 494 aaKnown RBP13.77□□□□□ -0.21
PHGDH-233ENST00000642021 ACVR1Q04771 509 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 CLCQ05315 142 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 MSANTD2Q6P1R3 559 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 PAQR3Q6TCH7 311 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 OFCC1Q8IZS5 231 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 TMEM125Q96AQ2 219 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 FEM1CQ96JP0 617 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 TMEM248Q9NWD8 314 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 HACD3Q9P035 362 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 ZNF225Q9UK10 706 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 PADI3Q9ULW8 664 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 OAS3Q9Y6K5 1087 aaKnown RBP13.77□□□□□ -0.21
PHGDH-233ENST00000642021 EI24O14681 340 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 PFDN1O60925 122 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 MATN4O95460 622 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 GSK3BP49841 420 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 SUOXP51687 545 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 TBX4P57082 545 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 EFEMP1Q12805 493 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 INPP5AQ14642 412 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 RPS6KA2Q15349 733 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 CYP51A1Q16850 503 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 FUT11Q495W5 492 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 RAP1GAP2Q684P5 730 aa13.77□□□□□ -0.21
PHGDH-233ENST00000642021 KLHL35Q6PF15 583 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms