RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CDH19Q9H159 772 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 ABCG8Q9H221 673 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 WSB2Q9NYS7 404 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 TXNDC16Q9P2K2 825 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 TTC28Q96AY4 2481 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 SMIM23A6NLE4 172 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 GAPDHSO14556 408 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 NDUFS2O75306 463 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 F7P08709 466 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 NUDT17P0C025 328 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 PMLP29590 882 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CDKN1CP49918 316 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 DMWDQ09019 674 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CTBP1Q13363 440 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 NFATC2Q13469 925 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 USP39Q53GS9 565 aaKnown RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 TEDDM1Q5T9Z0 273 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 SNX20Q7Z614 316 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 SDCCAG8Q86SQ7 713 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 LRRC6Q86X45 466 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 DENND6AQ8IWF6 608 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 RAVER1Q8IY67 606 aaKnown RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.39■□□□□ 0.372e-7■■■■■ 60.5
PHGDH-230ENST00000641927 C1QTNF7Q9BXJ2 289 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 FUT8Q9BYC5 575 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 SLC17A9Q9BYT1 436 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 MARCH4Q9P2E8 410 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CRLS1Q9UJA2 301 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 LRRK1Q38SD2 2015 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 TNFRSF10AO00220 468 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 SLC31A1O15431 190 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A9O60656 530 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 FSBPO95073 299 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 PCCBP05166 539 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A6P19224 532 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A1P22309 533 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A4P22310 534 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 FOXN2P32314 431 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A3P35503 534 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A5P35504 534 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 SLC1A2P43004 574 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 CSTF1Q05048 431 aaKnown RBP17.38■□□□□ 0.37
PHGDH-230ENST00000641927 ITGA9Q13797 1035 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 MAP7D1Q3KQU3 841 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 TMEM259Q4ZIN3 620 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 HENMT1Q5T8I9 393 aaKnown RBP17.38■□□□□ 0.37
PHGDH-230ENST00000641927 RAET1GQ6H3X3 334 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 PSAPL1Q6NUJ1 521 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 ZNF449Q6P9G9 518 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 PNPLA1Q8N8W4 532 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 DTWD2Q8NBA8 298 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 ZIM3Q96PE6 472 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 RUFY1Q96T51 708 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 ZSCAN5AQ9BUG6 496 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 C1QTNF2Q9BXJ5 285 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 C6orf106Q9H6K1 298 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A7Q9HAW7 530 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A10Q9HAW8 530 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 UGT1A8Q9HAW9 530 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 PRMT8Q9NR22 394 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-230ENST00000641927 VPS18Q9P253 973 aa17.38■□□□□ 0.37
PHGDH-230ENST00000641927 TRPM6Q9BX84 2022 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 FAM86C2PA6NEL3 165 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 MAP3K13O43283 966 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 C1QAP02745 245 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 IVLP07476 585 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 MSH2P43246 934 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 GPR1P46091 355 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 SLCO1A2P46721 670 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 FNTBP49356 437 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 CREB5Q02930 508 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 FGL2Q14314 439 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 SEMA3AQ14563 771 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 LRRC14Q15048 493 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 ATP13A5Q4VNC0 1218 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 ZNF765Q7L2R6 523 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 STRA8Q7Z7C7 330 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 TRIM69Q86WT6 500 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 CILP2Q8IUL8 1156 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 LMNTD2Q8IXW0 634 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 PIANPQ8IYJ0 282 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 IQCKQ8N0W5 287 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 TRAM1L1Q8N609 369 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 SGSM3Q96HU1 749 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 PAFAH2Q99487 392 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 KCTD5Q9NXV2 234 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 NFKBIL1Q9UBC1 381 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-230ENST00000641927 FBXO5Q9UKT4 447 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 PSAT1Q9Y617 370 aa17.37■□□□□ 0.37
PHGDH-230ENST00000641927 TLDC2A0PJX2 215 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 INHBAP08476 426 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 EIF3BP55884 814 aaKnown RBP17.36■□□□□ 0.37
PHGDH-230ENST00000641927 MPP1Q00013 466 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 WSCD2Q2TBF2 565 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 AARS2Q5JTZ9 985 aaKnown RBP17.36■□□□□ 0.37
PHGDH-230ENST00000641927 KIAA0895LQ68EN5 471 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 BMP8AQ7Z5Y6 402 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 CNTN4Q8IWV2 1026 aa17.36■□□□□ 0.37
PHGDH-230ENST00000641927 DEFB119Q8N690 84 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms