RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SAT1P21673 171 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CRHR1P34998 444 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 HMGCLP35914 325 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 SOX9P48436 509 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CCT5P48643 541 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 POLR2LP62875 67 aaKnown RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 IL9RQ01113 521 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 PRKCQQ04759 706 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 COL9A2Q14055 689 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 SEMA3AQ14563 771 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 USP10Q14694 798 aaKnown RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 BRAT1Q6PJG6 821 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 LVRNQ6Q4G3 990 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CRTC1Q6UUV9 634 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CDHR3Q6ZTQ4 885 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 TPRG1Q6ZUI0 275 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 SLC41A1Q8IVJ1 513 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 PNPLA1Q8N8W4 532 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CKAP2Q8WWK9 683 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 SCRN2Q96FV2 425 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 ELMO2Q96JJ3 720 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CABS1Q96KC9 395 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 MCCC1Q96RQ3 725 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 OSBPL6Q9BZF3 934 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 IQCGQ9H095 443 aaKnown RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 VPS11Q9H270 941 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 TMEM245Q9H330 911 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 C12orf65Q9H3J6 166 aaKnown RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 CAB39LQ9H9S4 337 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 THAP10Q9P2Z0 257 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-221ENST00000641573 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 FAM208BQ5VWN6 2430 aa13.07□□□□□ -0.32
PHGDH-221ENST00000641573 A0A096LPK6 155 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 FAM170BA6NMN3 283 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 SRRM3A6NNA2 597 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-221ENST00000641573 A8MX80 341 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 H7C0S8 307 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 TIMP2P16035 220 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 FOXN2P32314 431 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 GALK1P51570 392 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 XIAPP98170 497 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 SEMG2Q02383 582 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 PEX6Q13608 980 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 MLF2Q15773 248 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-221ENST00000641573 TYSND1Q2T9J0 566 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 ZNF805Q5CZA5 627 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 C9orf64Q5T6V5 341 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 SERPINA13PQ6UXR4 307 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 TSPAN33Q86UF1 283 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 STK40Q8N2I9 435 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 GPATCH11Q8N954 259 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 SCG3Q8WXD2 468 aaKnown RBP13.06□□□□□ -0.32
PHGDH-221ENST00000641573 OR8D1Q8WZ84 308 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 C19orf43Q9BQ61 176 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 CCDC134Q9H6E4 229 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 DKK3Q9UBP4 350 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 B4GALT6Q9UBX8 382 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 DCDC2Q9UHG0 476 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
PHGDH-221ENST00000641573 ANGPTL2Q9UKU9 493 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 HCN2Q9UL51 889 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
PHGDH-221ENST00000641573 PLLPQ9Y342 182 aa13.06□□□□□ -0.32
PHGDH-221ENST00000641573 MUC22E2RYF6 1773 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 GMNCA6NCL1 334 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 UPK3BL1B0FP48 263 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 UPK3BL2E5RIL1 263 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 SLC30A4O14863 429 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 LILRB5O75023 590 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 GLRA3O75311 464 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 PRNPP04156 253 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 C2P06681 752 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 CYP2A6P11509 494 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 PMLP29590 882 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 IL12RB1P42701 662 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 ETV4P43268 484 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 CSRP3P50461 194 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 STC1P52823 247 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 SEC24CP53992 1094 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 PFKPQ01813 784 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 POU4F1Q01851 419 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 SPEM2Q0P670 501 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 ILF2Q12905 390 aaKnown RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 ZRANB3Q5FWF4 1079 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 LRRC73Q5JTD7 316 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 RBM20Q5T481 1227 aaKnown RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 HECTD2Q5U5R9 776 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 EGFLAMQ63HQ2 1017 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 LRRC66Q68CR7 880 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 CBARPQ8N350 705 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 MAGEB18Q96M61 343 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms