RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GPR39O43194 453 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 ITM2AO43736 263 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 OR1I1O60431 355 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 LYPLA1O75608 230 aaPredicted RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 WISP3O95389 354 aaPredicted RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 SBK3P0C264 359 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 PKMP14618 531 aaKnown RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 PPARGP37231 505 aaPredicted RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 SLC26A3P40879 764 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 PTGER3P43115 390 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 SUOXP51687 545 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 EIF4HQ15056 248 aaKnown RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 TECRLQ5HYJ1 363 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 TMEM207Q6UWW9 146 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 CERS6Q6ZMG9 384 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 UBXN10Q96LJ8 280 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 TTC1Q99614 292 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 C20orf27Q9GZN8 174 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 CLDND1Q9NY35 253 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 B4GALT6Q9UBX8 382 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 TARM1B6A8C7 271 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 TBX10O75333 385 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 RBP1P09455 135 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 PSMC3P17980 439 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 PRKAA2P54646 552 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 ABCE1P61221 599 aaKnown RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 TIAL1Q01085 375 aaKnown RBP eCLIP21.35■■□□□ 1.01
SPAST-204ENST00000621856 DLX2Q07687 328 aaPredicted RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 LIPMQ5VYY2 423 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 SNX20Q7Z614 316 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 CBARPQ8N350 705 aaPredicted RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 CCT6BQ92526 530 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 ELSPBP1Q96BH3 223 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 SGF29Q96ES7 293 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 IL26Q9NPH9 171 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 FAM50BQ9Y247 325 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 MTF2Q9Y483 593 aaPredicted RBP21.35■■□□□ 1.01
SPAST-204ENST00000621856 COL4A3Q01955 1670 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 GAPDHSO14556 408 aaPredicted RBP21.34■■□□□ 1.01
SPAST-204ENST00000621856 HGSO14964 777 aaPredicted RBP21.34■■□□□ 1.01
SPAST-204ENST00000621856 PYGLP06737 847 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 CTSLP07711 333 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 KITP10721 976 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 CHRM1P11229 460 aaPredicted RBP21.34■■□□□ 1.01
SPAST-204ENST00000621856 CYP2A6P11509 494 aaPredicted RBP21.34■■□□□ 1.01
SPAST-204ENST00000621856 LAMP2P13473 410 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 LHCGRP22888 699 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 XPAP23025 273 aaPredicted RBP21.34■■□□□ 1.01
SPAST-204ENST00000621856 ARFIP2P53365 341 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 ACAP2Q15057 778 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 SERPINA9Q86WD7 417 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 TERB1Q8NA31 727 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 LRIG1Q96JA1 1093 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 KDM4CQ9H3R0 1056 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 SYTL2Q9HCH5 934 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 GTSE1Q9NYZ3 720 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 MARCOQ9UEW3 520 aaPredicted RBP21.34■■□□□ 1.01
SPAST-204ENST00000621856 CRLS1Q9UJA2 301 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 COMMD10Q9Y6G5 202 aa21.34■■□□□ 1.01
SPAST-204ENST00000621856 TMEM114B3SHH9 223 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 ANKRD65E5RJM6 399 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 VPS26AO75436 327 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 ZNF37AP17032 561 aaPredicted RBP21.33■■□□□ 1.01
SPAST-204ENST00000621856 TFEBP19484 476 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 NFKBIAP25963 317 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 GDI1P31150 447 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 MTHFRP42898 656 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 PTPN5P54829 565 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 ASPHQ12797 758 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 NFATC2Q13469 925 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 ARHGEF7Q14155 803 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 CHRNA6Q15825 494 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 ZNF805Q5CZA5 627 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 LYPLAL1Q5VWZ2 237 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 PARM1Q6UWI2 310 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 BIRC8Q96P09 236 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 GPR21Q99679 349 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 GATA5Q9BWX5 397 aaPredicted RBP21.33■■□□□ 1.01
SPAST-204ENST00000621856 TMEM120AQ9BXJ8 343 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 LMCD1Q9NZU5 365 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 DNAJC16Q9Y2G8 782 aa21.33■■□□□ 1.01
SPAST-204ENST00000621856 TSPAN11A1L157 253 aa21.32■■□□□ 1
SPAST-204ENST00000621856 TBC1D3BA6NDS4 549 aa21.32■■□□□ 1
SPAST-204ENST00000621856 UPK3BL1B0FP48 263 aa21.32■■□□□ 1
SPAST-204ENST00000621856 UPK3BL2E5RIL1 263 aa21.32■■□□□ 1
SPAST-204ENST00000621856 DLX3O60479 287 aa21.32■■□□□ 1
SPAST-204ENST00000621856 DCTN3O75935 186 aa21.32■■□□□ 1
SPAST-204ENST00000621856 ESR1P03372 595 aa21.32■■□□□ 1
SPAST-204ENST00000621856 C1SP09871 688 aa21.32■■□□□ 1
SPAST-204ENST00000621856 VIPR1P32241 457 aa21.32■■□□□ 1
SPAST-204ENST00000621856 GJA4P35212 333 aa21.32■■□□□ 1
SPAST-204ENST00000621856 OPRD1P41143 372 aa21.32■■□□□ 1
SPAST-204ENST00000621856 PTSQ03393 145 aa21.32■■□□□ 1
SPAST-204ENST00000621856 CTSL3PQ5NE16 218 aa21.32■■□□□ 1
SPAST-204ENST00000621856 NAIF1Q69YI7 327 aaPredicted RBP21.32■■□□□ 1
SPAST-204ENST00000621856 NAPRTQ6XQN6 538 aa21.32■■□□□ 1
SPAST-204ENST00000621856 GPR26Q8NDV2 337 aa21.32■■□□□ 1
SPAST-204ENST00000621856 OR6Y1Q8NGX8 325 aa21.32■■□□□ 1
SPAST-204ENST00000621856 UCMAQ8WVF2 138 aa21.32■■□□□ 1
SPAST-204ENST00000621856 TRMT6Q9UJA5 497 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms