RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SPATS2LQ9NUQ6 558 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 STX18Q9P2W9 335 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 VTI1BQ9UEU0 232 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 RNF112Q9ULX5 631 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 RPL26L1Q9UNX3 145 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 ZNF232Q9UNY5 417 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 BTRCQ9Y297 605 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 NPEPPSL1A6NEC2 478 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 TGM5O43548 720 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
CIITA-212ENST00000618207 CLTBP09497 229 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 RAG1P15918 1043 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 AGTR2P50052 363 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 SH3BP2P78314 561 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 TNK2Q07912 1038 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 ART3Q13508 389 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 RAB33AQ14088 237 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 LRRC26Q2I0M4 334 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 UNC50Q53HI1 259 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 LRRC73Q5JTD7 316 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 FAM151BQ6UXP7 276 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 DDIASQ8IXT1 998 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 OVCA2Q8WZ82 227 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 CORO1BQ9BR76 489 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 ADGRE3Q9BY15 652 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 HCFC1R1Q9NWW0 138 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 TAS2R13Q9NYV9 303 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 E5RI56 91 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 IMPDH1P20839 514 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 WDR5P61964 334 aaKnown RBP12.36□□□□□ -0.43
CIITA-212ENST00000618207 MMEL1Q495T6 779 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 AGKQ53H12 422 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 ACBD5Q5T8D3 534 aaPredicted RBP12.36□□□□□ -0.43
CIITA-212ENST00000618207 ALG1LQ6GMV1 187 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 KBTBD2Q8IY47 623 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 ACTRT2Q8TDY3 377 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 EID2BQ96D98 161 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 IL21Q9HBE4 155 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 EML4Q9HC35 981 aaKnown RBP12.36□□□□□ -0.43
CIITA-212ENST00000618207 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 TIMM22Q9Y584 194 aa12.36□□□□□ -0.43
CIITA-212ENST00000618207 TRPC5OSA6NMA1 111 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 SLCO1B7G3V0H7 640 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 MTHFD2P13995 350 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 STK19P49842 368 aaPredicted RBP12.35□□□□□ -0.43
CIITA-212ENST00000618207 RPS6KA3P51812 740 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 DNAJB13P59910 316 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 AP2B1P63010 937 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 SETMARQ53H47 684 aaPredicted RBP12.35□□□□□ -0.43
CIITA-212ENST00000618207 AFTPHQ6ULP2 937 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 CHST9Q7L1S5 443 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 SLC22A9Q8IVM8 553 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 CPNE9Q8IYJ1 553 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 KYQ8NBH2 561 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 LPGAT1Q92604 370 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 ZNF689Q96CS4 500 aaPredicted RBP12.35□□□□□ -0.43
CIITA-212ENST00000618207 CCDC126Q96EE4 140 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 RTKNQ9BST9 563 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 ZBTB26Q9HCK0 441 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 COMMD10Q9Y6G5 202 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 TRIM43BA6NCK2 446 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 UBDO15205 165 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 CCL16O15467 120 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 LRG1P02750 347 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 EEF1DP29692 281 aaKnown RBP12.35□□□□□ -0.43
CIITA-212ENST00000618207 DPP6P42658 865 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 THOP1P52888 689 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 CCNIQ14094 377 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 CMTM8Q8IZV2 173 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 FBXW8Q8N3Y1 598 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 CLDN19Q8N6F1 224 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
CIITA-212ENST00000618207 TRIM43Q96BQ3 446 aaPredicted RBP12.35□□□□□ -0.43
CIITA-212ENST00000618207 NDE1Q9NXR1 346 aa12.35□□□□□ -0.43
CIITA-212ENST00000618207 FGF18O76093 207 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 UGT1A6P19224 532 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 OGNP20774 298 aaKnown RBP12.34□□□□□ -0.43
CIITA-212ENST00000618207 UGT1A1P22309 533 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 UGT1A4P22310 534 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 PRDX3P30048 256 aaKnown RBP12.34□□□□□ -0.43
CIITA-212ENST00000618207 CD70P32970 193 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 CA5AP35218 305 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 UGT1A3P35503 534 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 UGT1A5P35504 534 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 RBBP5Q15291 538 aaKnown RBP12.34□□□□□ -0.43
CIITA-212ENST00000618207 LPCAT4Q643R3 524 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 NCEH1Q6PIU2 408 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 MYLK4Q86YV6 388 aaPredicted RBP12.34□□□□□ -0.43
CIITA-212ENST00000618207 TRMT2BQ96GJ1 504 aaKnown RBP12.34□□□□□ -0.43
CIITA-212ENST00000618207 BIRC8Q96P09 236 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
CIITA-212ENST00000618207 IL1RL2Q9HB29 575 aa12.34□□□□□ -0.43
CIITA-212ENST00000618207 ADA2Q9NZK5 511 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms