RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CEP97Q8IW35 865 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 GDAP1Q8TB36 358 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 FAM111AQ96PZ2 611 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 GABRG3Q99928 467 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 VPS11Q9H270 941 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SLC2A4RGQ9NR83 387 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.7■□□□□ 0.9
PNKP-203ENST00000593946 DCDC2Q9UHG0 476 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 TRBV5-4A0A0C4DH59 114 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 PFDN6O15212 129 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 NDUFS3O75489 264 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 DHRS4L1P0CG22 281 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 ITGALP20701 1170 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SAT1P21673 171 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 NTSR1P30989 418 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 GRSF1Q12849 480 aaKnown RBP eCLIP20.7■□□□□ 0.9
PNKP-203ENST00000593946 INSCQ1MX18 579 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 HECTD2Q5U5R9 776 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 ZNF549Q6P9A3 640 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 CERS6Q6ZMG9 384 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 RFLNAQ6ZTI6 216 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 DYDC1Q8WWB3 177 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.7■□□□□ 0.9
PNKP-203ENST00000593946 MSANTD3Q96H12 275 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 OLFM1Q99784 485 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 RSPH9Q9H1X1 276 aaPredicted RBP20.7■□□□□ 0.9
PNKP-203ENST00000593946 PKD2L2Q9NZM6 624 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 GRID1Q9ULK0 1009 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 VWA7Q9Y334 891 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SHISA7A6NL88 538 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 AGAP14A8MT82 685 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 AREL1O15033 823 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 PHGDHO43175 533 aaKnown RBP20.69■□□□□ 0.9
PNKP-203ENST00000593946 GSTA1P08263 222 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 SRFP11831 508 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 ADRB3P13945 408 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 CRABP2P29373 138 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 GMPRP36959 345 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 PSMD8P48556 350 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 PGGT1BP53609 377 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 TDGQ13569 410 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 CHRNA6Q15825 494 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 SEPT7Q16181 437 aaKnown RBP20.69■□□□□ 0.9
PNKP-203ENST00000593946 PUS10Q3MIT2 529 aaKnown RBP20.69■□□□□ 0.9
PNKP-203ENST00000593946 TAF1BQ53T94 588 aaPredicted RBP20.69■□□□□ 0.9
PNKP-203ENST00000593946 C2orf27AQ580R0 203 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 HHATQ5VTY9 493 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 FAM46CQ5VWP2 391 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 FAM45BPQ6NSW5 357 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 FBXL19Q6PCT2 694 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 RAPH1Q70E73 1250 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 TAS2R42Q7RTR8 314 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 HSD11B1LQ7Z5J1 315 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 IL17RCQ8NAC3 791 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 FAM45AQ8TCE6 357 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 CKAP2Q8WWK9 683 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 ERLEC1Q96DZ1 483 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 HDAC8Q9BY41 377 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 ASB8Q9H765 288 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 DYRK4Q9NR20 520 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 NFKBIL1Q9UBC1 381 aaPredicted RBP20.69■□□□□ 0.9
PNKP-203ENST00000593946 FAM50BQ9Y247 325 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 ITM2BQ9Y287 266 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 ANKRD6Q9Y2G4 727 aa20.69■□□□□ 0.9
PNKP-203ENST00000593946 TRIOO75962 3097 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 SRRM3A6NNA2 597 aaPredicted RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 LOC730098B7Z3J9 87 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 SYNCRIPO60506 623 aaKnown RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 IL9P15248 144 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 SLC12A2P55011 1212 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 ADARP55265 1226 aaKnown RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 DCDC1P59894 354 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 IRF9Q00978 393 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 IL9RQ01113 521 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 ELP6Q0PNE2 266 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 ZNF460Q14592 562 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 GPR33Q49SQ1 333 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 LIPIQ6XZB0 460 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 KYAT3Q6YP21 454 aaKnown RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 ERN2Q76MJ5 926 aaKnown RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 PLD6Q8N2A8 252 aaKnown RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 TSPAN17Q96FV3 270 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 AARSD1Q9BTE6 412 aaKnown RBP20.68■□□□□ 0.9
PNKP-203ENST00000593946 TLK1Q9UKI8 766 aa20.68■□□□□ 0.9
PNKP-203ENST00000593946 UBA6A0AVT1 1052 aaPredicted RBP20.67■□□□□ 0.9
PNKP-203ENST00000593946 H0Y858 1186 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 FDXRP22570 491 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 CA5AP35218 305 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 PTGER3P43115 390 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 CDKN2DP55273 166 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 SATB1Q01826 763 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 TAX1BP1Q86VP1 789 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 LCA5Q86VQ0 697 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 SERPINA9Q86WD7 417 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 ZNF398Q8TD17 642 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 BIRC8Q96P09 236 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 PAIP2Q9BPZ3 127 aaKnown RBP20.67■□□□□ 0.9
PNKP-203ENST00000593946 C1QTNF1Q9BXJ1 281 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 EMCNQ9ULC0 261 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 RGSL1A5PLK6 1076 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms