RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CPNE8Q86YQ8 564 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 TMTC1Q8IUR5 882 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 SLITRK4Q8IW52 837 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 RHOT2Q8IXI1 618 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.29□□□□□ -0.12
MBD1-220ENST00000589758 SLC35G2Q8TBE7 412 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 SCAMP4Q969E2 229 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 OR2M4Q96R27 311 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 LYSMD1Q96S90 227 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 DTLQ9NZJ0 730 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 AKAP7Q9P0M2 348 aaPredicted RBP14.29□□□□□ -0.12
MBD1-220ENST00000589758 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 TFR2Q9UP52 801 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 LOXL2Q9Y4K0 774 aa14.29□□□□□ -0.12
MBD1-220ENST00000589758 ANKRD66B4E2M5 251 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 PRLP01236 227 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 HGFP14210 728 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 ALDH4A1P30038 563 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 SLC10A2Q12908 348 aaPredicted RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 IHHQ14623 411 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 PYCR3Q53H96 274 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 PHF19Q5T6S3 580 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 IGSF10Q6WRI0 2623 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 RFLNAQ6ZTI6 216 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 VSIG1Q86XK7 387 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 CCDC170Q8IYT3 715 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 NAGSQ8N159 534 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 UNC13CQ8NB66 2214 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 LPCAT1Q8NF37 534 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 CCHCR1Q8TD31 782 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 RAPGEF5Q92565 580 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 COX14Q96I36 57 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 ARHGEF17Q96PE2 2063 aaPredicted RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 CCNL2Q96S94 520 aaPredicted RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 BAG1Q99933 345 aaPredicted RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 RIOK2Q9BVS4 552 aaKnown RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 MAK16Q9BXY0 300 aaKnown RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 ADGRE3Q9BY15 652 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 B3GNT4Q9C0J1 378 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 PKD2L2Q9NZM6 624 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 PISDQ9UG56 409 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 PCDHA13Q9Y5I0 950 aa14.28□□□□□ -0.12
MBD1-220ENST00000589758 EPN1Q9Y6I3 576 aaPredicted RBP14.28□□□□□ -0.12
MBD1-220ENST00000589758 A0A0U1RQS6 177 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 LRRD1A4D1F6 860 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 RGSL1A5PLK6 1076 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 NDUFA10O95299 355 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 CLDN7O95471 211 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 ASMTLO95671 621 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 JCHAINP01591 159 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 PRB1P04280 392 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 CD82P27701 267 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 ACTR1BP42025 376 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 OR1D5P58170 312 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 ACTR1AP61163 376 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.13
MBD1-220ENST00000589758 CFHR1Q03591 330 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 PPIDQ08752 370 aaKnown RBP14.27□□□□□ -0.13
MBD1-220ENST00000589758 TRA2AQ13595 282 aaKnown RBP eCLIP14.27□□□□□ -0.13
MBD1-220ENST00000589758 LRP8Q14114 963 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 AMZ1Q400G9 498 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 PCSK4Q6UW60 755 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 GALNT13Q8IUC8 556 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 SMIM14Q96QK8 99 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 DPYSL5Q9BPU6 564 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 MLPHQ9BV36 600 aaPredicted RBP14.27□□□□□ -0.13
MBD1-220ENST00000589758 GRPEL1Q9HAV7 217 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 VPS18Q9P253 973 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 INTUQ9ULD6 942 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 TMEM98Q9Y2Y6 226 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 ST14Q9Y5Y6 855 aa14.27□□□□□ -0.13
MBD1-220ENST00000589758 SCN8AQ9UQD0 1980 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 C1orf232A0A0U1RR37 186 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 KCNK1O00180 336 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 APOL1O14791 398 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
MBD1-220ENST00000589758 C1QL1O75973 258 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 MTA2O94776 668 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 IPO7O95373 1038 aaKnown RBP14.26□□□□□ -0.13
MBD1-220ENST00000589758 LCA5LO95447 670 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 LIPCP11150 499 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
MBD1-220ENST00000589758 ITIH1P19827 911 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 FECHP22830 423 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 CD86P42081 329 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
MBD1-220ENST00000589758 SPINT3P49223 89 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 SQSTM1Q13501 440 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 PDK1Q15118 436 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 QPCTQ16769 361 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 ODF2Q5BJF6 829 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 TMEM164Q5U3C3 297 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 LRRC38Q5VT99 294 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 SLC9A4Q6AI14 798 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 USP53Q70EK8 1073 aa14.26□□□□□ -0.13
MBD1-220ENST00000589758 MARK2Q7KZI7 788 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms