RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 SPATA16Q9BXB7 569 aa22.53■■□□□ 1.2
ACTN4-210ENST00000588618 IARS2Q9NSE4 1012 aaKnown RBP22.53■■□□□ 1.2
ACTN4-210ENST00000588618 MARCH4Q9P2E8 410 aaPredicted RBP22.53■■□□□ 1.2
ACTN4-210ENST00000588618 EML5Q05BV3 1969 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 K7ESF4 209 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 SRP72O76094 671 aaKnown RBP22.52■■□□□ 1.2
ACTN4-210ENST00000588618 IVLP07476 585 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 CA5AP35218 305 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 ITGA9Q13797 1035 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 USP39Q53GS9 565 aaKnown RBP22.52■■□□□ 1.2
ACTN4-210ENST00000588618 SETMARQ53H47 684 aaPredicted RBP22.52■■□□□ 1.2
ACTN4-210ENST00000588618 TEDDM1Q5T9Z0 273 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 ZNF470Q6ECI4 717 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 TECPR1Q7Z6L1 1165 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 SDCCAG8Q86SQ7 713 aaPredicted RBP22.52■■□□□ 1.2
ACTN4-210ENST00000588618 EPS8L3Q8TE67 593 aaKnown RBP22.52■■□□□ 1.2
ACTN4-210ENST00000588618 RLN3Q8WXF3 142 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 ASB8Q9H765 288 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 PSAT1Q9Y617 370 aa22.52■■□□□ 1.2
ACTN4-210ENST00000588618 AGPSO00116 658 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 PFDN6O15212 129 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 CD3EAPO15446 510 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 NDUFS2O75306 463 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 PMLP29590 882 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 CACNG1Q06432 222 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 ZNF844Q08AG5 666 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 SEMA3AQ14563 771 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 AARS2Q5JTZ9 985 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 TAS2R42Q7RTR8 314 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 LRRC6Q86X45 466 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 C1orf210Q8IVY1 113 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 FBXL6Q8N531 539 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 PPM1NQ8N819 430 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 SCAMP4Q969E2 229 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 MRRFQ96E11 262 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 TTC1Q99614 292 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 ZSCAN5AQ9BUG6 496 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 NSMCE4AQ9NXX6 385 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 MAT2AP31153 395 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 CDKN1CP49918 316 aaPredicted RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 EIF3BP55884 814 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 CREB5Q02930 508 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 MAP7D1Q3KQU3 841 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 SNX20Q7Z614 316 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 DENND6AQ8IWF6 608 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 TMEM105Q8N8V8 129 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 SGSM3Q96HU1 749 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 RIOK2Q9BVS4 552 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 VIPAS39Q9H9C1 493 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 WSB2Q9NYS7 404 aaPredicted RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 VPS18Q9P253 973 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 NFKBIL1Q9UBC1 381 aaPredicted RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 CRLS1Q9UJA2 301 aa22.51■■□□□ 1.19
ACTN4-210ENST00000588618 ZFR2Q9UPR6 939 aaKnown RBP22.51■■□□□ 1.19
ACTN4-210ENST00000588618 POC1B-GALNT4F8VUJ3 575 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 FAM155BO75949 473 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 FOXN2P32314 431 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 PPARGP37231 505 aaPredicted RBP22.5■■□□□ 1.19
ACTN4-210ENST00000588618 NFATC2Q13469 925 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 NAB1Q13506 487 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 CHRNA6Q15825 494 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 ZNF765Q7L2R6 523 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 BMP8AQ7Z5Y6 402 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 TRIM69Q86WT6 500 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 CNTN4Q8IWV2 1026 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 TRAM1L1Q8N609 369 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 ZNF398Q8TD17 642 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 GPR174Q9BXC1 333 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 SLC17A9Q9BYT1 436 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 ABCG8Q9H221 673 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 PRMT8Q9NR22 394 aaPredicted RBP22.5■■□□□ 1.19
ACTN4-210ENST00000588618 CTNNAL1Q9UBT7 734 aa22.5■■□□□ 1.19
ACTN4-210ENST00000588618 IGHV1OR15-9A0A0B4J2B8 117 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 TNFRSF10AO00220 468 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PAK4O96013 591 aaPredicted RBP22.49■■□□□ 1.19
ACTN4-210ENST00000588618 INHBAP08476 426 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 HOXA6P31267 233 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 MSH2P43246 934 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 SLCO1A2P46721 670 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PPP2CBP62714 309 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PPP2CAP67775 309 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 GPR33Q49SQ1 333 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 TMEM259Q4ZIN3 620 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 HENMT1Q5T8I9 393 aaKnown RBP22.49■■□□□ 1.19
ACTN4-210ENST00000588618 RAET1GQ6H3X3 334 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PSAPL1Q6NUJ1 521 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 TSSK4Q6SA08 328 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 LRIG3Q6UXM1 1119 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 MARK2Q7KZI7 788 aaKnown RBP22.49■■□□□ 1.19
ACTN4-210ENST00000588618 LDB1Q86U70 411 aaPredicted RBP22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PIANPQ8IYJ0 282 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PELI3Q8N2H9 469 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 KLK6Q92876 244 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 PAFAH2Q99487 392 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 DHRS4Q9BTZ2 278 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 FAM96AQ9H5X1 160 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 EURLQ9NYK6 297 aa22.49■■□□□ 1.19
ACTN4-210ENST00000588618 CCDC163A0A0D9SF12 145 aa22.48■■□□□ 1.19
ACTN4-210ENST00000588618 SMIM23A6NLE4 172 aa22.48■■□□□ 1.19
ACTN4-210ENST00000588618 PYGLP06737 847 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms