RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 MFN1Q8IWA4 741 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 NKAPQ8N5F7 415 aaKnown RBP16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ASB9Q96DX5 294 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SPDL1Q96EA4 605 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 C3orf30Q96M34 536 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 C1QTNF3Q9BXJ4 246 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 HACD3Q9P035 362 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 DLGAP2Q9P1A6 1054 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FAM50BQ9Y247 325 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ANKRD12Q6UB98 2062 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ZNF106Q9H2Y7 1883 aaKnown RBP16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SYCE1LA8MT33 242 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 KLK8O60259 260 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 CLASP2O75122 1294 aaKnown RBP16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 UPP2O95045 317 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 GFAPP14136 432 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 MC4RP32245 332 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 CLCN4P51793 760 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 VEPH1Q14D04 833 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TAF12Q16514 161 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 LRRC36Q1X8D7 754 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PSAPL1Q6NUJ1 521 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 BHLHE22Q8NFJ8 381 aaPredicted RBP16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TOP1MTQ969P6 601 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ZFRQ96KR1 1074 aaKnown RBP16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SMIM14Q96QK8 99 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 GPR21Q99679 349 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SUCOQ9UBS9 1254 aaKnown RBP16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FKBPLQ9UIM3 349 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 RNF112Q9ULX5 631 aa16.42■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SCN8AQ9UQD0 1980 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PPP6CO00743 305 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 STX16O14662 325 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FZD6O60353 706 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FKTNO75072 461 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 RPS17P08708 135 aaKnown RBP16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ALDOCP09972 364 aaKnown RBP16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PKMP14618 531 aaKnown RBP16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 UQCRBP14927 111 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 AQP4P55087 323 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ADARP55265 1226 aaKnown RBP16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 STX1BP61266 288 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 CLCQ05315 142 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 LCP2Q13094 533 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PTPRNQ16849 979 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 OR52E8Q6IFG1 317 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 C8orf82Q6P1X6 216 aaPredicted RBP16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PHYKPLQ8IUZ5 450 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FBXO39Q8N4B4 442 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TTC30BQ8N4P2 665 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TWIST2Q8WVJ9 160 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FUBP1Q96AE4 644 aaKnown RBP16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 AKTIPQ9H8T0 292 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 LHX3Q9UBR4 397 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 IKZF3Q9UKT9 509 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 LTBP2Q14767 1821 aa16.41■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ATP6AP2A0A1C7CYW4 349 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 LRRC14BA6NHZ5 514 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SUPT3HB4E1H0 165 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 E7ENX8 843 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TRIM24O15164 1050 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 STX7O15400 261 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 NRP2O60462 931 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SNAP91O60641 907 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 VPS26AO75436 327 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 SUPT3HO75486 399 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ATP6AP2O75787 350 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 LYNP07948 512 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 MBL2P11226 248 aaPredicted RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 GPX3P22352 226 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 EEF1DP29692 281 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 CDKN1CP49918 316 aaPredicted RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FOXA1P55317 472 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 MRPS22P82650 360 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TSNQ15631 228 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ANKRD33Q7Z3H0 272 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TMEM150AQ86TG1 271 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PIANPQ8IYJ0 282 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PCDH20Q8N6Y1 951 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 RNF148Q8N7C7 305 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TRPC4APQ8TEL6 797 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 NSUN5Q96P11 429 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 BTBD9Q96Q07 612 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 HERC2P3Q9BVR0 1158 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 FBRSL1Q9HCM7 1045 aaKnown RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PAK6Q9NQU5 681 aaPredicted RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ADA2Q9NZK5 511 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 OR51B4Q9Y5P0 310 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 COMMD10Q9Y6G5 202 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 BBIP1A8MTZ0 92 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 H0Y626 953 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 GFRA2O00451 464 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 MRASO14807 208 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 PIP5K1BO14986 540 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TBL1XO60907 577 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 ECI2O75521 394 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 TSPAN12O95859 305 aa16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
APOC4-APOC2-201ENST00000585685 MSX2P35548 267 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms