RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 A0A0J9YYE9 177 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 A0A0U1RQS6 177 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 A0A1B0GTH6 734 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 BLACEA4D250 179 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 GOLGA6CA6NDK9 693 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 GOLGA6BA6NDN3 693 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 B4E171 279 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 GOLGA6L22H0YM25 854 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 MBD3O95983 291 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 TRBC1P01850 177 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 GOLGA6DP0CG33 693 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 THRAP10827 490 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 CSTF2P33240 577 aaKnown RBP eCLIP10.54□□□□□ -0.72
RFFL-209ENST00000581265 UGT1A3P35503 534 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 TSPAN7P41732 249 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 ACTR1BP42025 376 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 ACTR1AP61163 376 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 CYP4F2P78329 520 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 SLC25A11Q02978 314 aaKnown RBP10.54□□□□□ -0.72
RFFL-209ENST00000581265 IHHQ14623 411 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 NR1I3Q14994 352 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 ANO6Q4KMQ2 910 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 SDK2Q58EX2 2172 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 FIGNQ5HY92 759 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 HGSNATQ68CP4 663 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 NRSN1Q8IZ57 195 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 SFRP1Q8N474 314 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 CCDC112Q8NEF3 446 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 FATE1Q969F0 183 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 COX14Q96I36 57 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 POLR1EQ9GZS1 481 aaKnown RBP10.54□□□□□ -0.72
RFFL-209ENST00000581265 NT5MQ9NPB1 228 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 GOLGA6AQ9NYA3 693 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 IP6K2Q9UHH9 426 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 AMACRQ9UHK6 382 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 CD84Q9UIB8 345 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 PLEKHM1Q9Y4G2 1056 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 B3GALT1Q9Y5Z6 326 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 BZW2Q9Y6E2 419 aaKnown RBP10.54□□□□□ -0.72
RFFL-209ENST00000581265 UBR5O95071 2799 aaPredicted RBP10.54□□□□□ -0.72
RFFL-209ENST00000581265 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
RFFL-209ENST00000581265 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 MATN3O15232 486 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 PRLP01236 227 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 MPSTP25325 297 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 CSF2RBP32927 897 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 GARSP41250 739 aaKnown RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 CCR10P46092 362 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 ARSEP51690 589 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 STC1P52823 247 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 RPL26P61254 145 aaKnown RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 ITKQ08881 620 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 GALNT2Q10471 571 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 CCDC122Q5T0U0 273 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 DOK6Q6PKX4 331 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 WDR74Q6RFH5 385 aaPredicted RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 FAM26EQ8N5C1 309 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 JPH3Q8WXH2 748 aaPredicted RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 MAML1Q92585 1016 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 SYN2Q92777 582 aaPredicted RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 ART4Q93070 314 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 PMEPA1Q969W9 287 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 TSGA13Q96PP4 275 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 SMIM14Q96QK8 99 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 LYSMD1Q96S90 227 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 AGAP2Q99490 1192 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 FUCA2Q9BTY2 467 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 RIOK2Q9BVS4 552 aaKnown RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 SPRY4Q9C004 299 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 SLC25A18Q9H1K4 315 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 ADNPQ9H2P0 1102 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 SLC39A1Q9NY26 324 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 VPS18Q9P253 973 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 DNPEPQ9ULA0 475 aa10.53□□□□□ -0.72
RFFL-209ENST00000581265 RPL26L1Q9UNX3 145 aaKnown RBP10.53□□□□□ -0.72
RFFL-209ENST00000581265 MYO1FO00160 1098 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 CAPN5O15484 640 aaPredicted RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 DNAJC6O75061 913 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 EML2O95834 649 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 CYP1A2P05177 515 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 CD48P09326 243 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 CCNCP24863 283 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 ZNF165P49910 485 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 EPHB1P54762 984 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 RAB15P59190 212 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 MMRN1Q13201 1228 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 KRT81Q14533 505 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 CLCA4Q14CN2 919 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 PAFAH1B3Q15102 231 aaKnown RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 DCAF12Q5T6F0 453 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 BORAQ6PGQ7 559 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 IYDQ6PHW0 289 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 MARK2Q7KZI7 788 aaKnown RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 ARHGAP22Q7Z5H3 698 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 TRIM74Q86UV6 250 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 PTRH1Q86Y79 214 aaKnown RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 GALNT13Q8IUC8 556 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms