RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SEC13P55735 322 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 TAS2R39P59534 338 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 ELP6Q0PNE2 266 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 RALGDSQ12967 914 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 NFATC2Q13469 925 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 PON2Q15165 354 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 PPM1JQ5JR12 505 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 HECTD2Q5U5R9 776 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 LYPLAL1Q5VWZ2 237 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 PTCRAQ6ISU1 281 aaPredicted RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 FBXL19Q6PCT2 694 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 TAS2R42Q7RTR8 314 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 TRMT11Q7Z4G4 463 aaKnown RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 CLEC14AQ86T13 490 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 MMAAQ8IVH4 418 aaKnown RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 RAVER1Q8IY67 606 aaKnown RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 GDAP1Q8TB36 358 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 CKAP2Q8WWK9 683 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 NDNQ99608 321 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 PAIP2Q9BPZ3 127 aaKnown RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 ASB8Q9H765 288 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 CRYL1Q9Y2S2 319 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 VWA7Q9Y334 891 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 SPTBN5Q9NRC6 3674 aaKnown RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 A0A087X1B8 175 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 RGSL1A5PLK6 1076 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 ANTXRLA6NF34 631 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 PSMD11O00231 422 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 SYNCRIPO60506 623 aaKnown RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 RNASEH1O60930 286 aaKnown RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 DHRS4L1P0CG22 281 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 COL6A2P12110 1019 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 NTSR1P30989 418 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 PSMD8P48556 350 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 CDKN1CP49918 316 aaPredicted RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 ADARP55265 1226 aaKnown RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 DCDC1P59894 354 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 SDE2Q6IQ49 451 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 PNPLA1Q8N8W4 532 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 GPR26Q8NDV2 337 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 TSNARE1Q96NA8 513 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 GABRG3Q99928 467 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 HDAC8Q9BY41 377 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 CDH19Q9H159 772 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 CCDC68Q9H2F9 335 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 FAM96AQ9H5X1 160 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 SLC2A4RGQ9NR83 387 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 NFKBIL1Q9UBC1 381 aaPredicted RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 TCF20Q9UGU0 1960 aaKnown RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 SCN8AQ9UQD0 1980 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 ACOT9Q9Y305 439 aa18.47■□□□□ 0.55
PRKCA-203ENST00000578063 ZNF106Q9H2Y7 1883 aaKnown RBP18.47■□□□□ 0.55
PRKCA-203ENST00000578063 TRBV5-4A0A0C4DH59 114 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 UBA6A0AVT1 1052 aaPredicted RBP18.46■□□□□ 0.55
PRKCA-203ENST00000578063 H0Y858 1186 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 PHGDHO43175 533 aaKnown RBP18.46■□□□□ 0.55
PRKCA-203ENST00000578063 EGFP01133 1207 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 SLC35E2BP0CK96 405 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 SRFP11831 508 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ADRB3P13945 408 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 WASP42768 502 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 PTGER3P43115 390 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 STARD3Q14849 445 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ERN2Q76MJ5 926 aaKnown RBP18.46■□□□□ 0.55
PRKCA-203ENST00000578063 CEP97Q8IW35 865 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 DTX3LQ8TDB6 740 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 RAB7BQ96AH8 199 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 MAGEB18Q96M61 343 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 OLFM1Q99784 485 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 AARSD1Q9BTE6 412 aaKnown RBP18.46■□□□□ 0.55
PRKCA-203ENST00000578063 FBRSQ9HAH7 460 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 CRLS1Q9UJA2 301 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 COMMD10Q9Y6G5 202 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ELFN1P0C7U0 828 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 FDXRP22570 491 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 METAP1P53582 386 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 TDGQ13569 410 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ITGA9Q13797 1035 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 CHRNA6Q15825 494 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 N4BP2L1Q5TBK1 243 aaPredicted RBP18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ZNF549Q6P9A3 640 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ZNF398Q8TD17 642 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 ULK4Q96C45 1275 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 EPN3Q9H201 632 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 C12orf65Q9H3J6 166 aaKnown RBP18.46■□□□□ 0.55
PRKCA-203ENST00000578063 POPDC3Q9HBV1 291 aa18.46■□□□□ 0.55
PRKCA-203ENST00000578063 AGAP14A8MT82 685 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 AREL1O15033 823 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 TOP3BO95985 862 aaKnown RBP18.45■□□□□ 0.54
PRKCA-203ENST00000578063 ADH1BP00325 375 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 MRPS21P82921 87 aaKnown RBP18.45■□□□□ 0.54
PRKCA-203ENST00000578063 IRF9Q00978 393 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 DBN1Q16643 649 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 PDK4Q16654 411 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 CCDC153Q494R4 210 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 HABP4Q5JVS0 413 aaKnown RBP18.45■□□□□ 0.54
PRKCA-203ENST00000578063 HSD11B1LQ7Z5J1 315 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 SERPINA9Q86WD7 417 aa18.45■□□□□ 0.54
PRKCA-203ENST00000578063 GPR39O43194 453 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms