RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	LEPR	P48357	1165 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	SERPINB9	P50453	376 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ADPRH	P54922	357 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF284	Q2VY69	593 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZRANB3	Q5FWF4	1079 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	CEP85L	Q5SZL2	805 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	HENMT1	Q5T8I9	393 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3G	Q6DHY5	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3C	Q6IPX1	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	CACUL1	Q86Y37	369 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	CILP2	Q8IUL8	1156 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TRAM1L1	Q8N609	369 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	OR2T34	Q8NGX1	318 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	DCAKD	Q8WVC6	231 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ULK4	Q96C45	1275 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	AGAP2	Q99490	1192 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZSCAN5A	Q9BUG6	496 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	WRAP53	Q9BUR4	548 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	C1QTNF2	Q9BXJ5	285 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ABCG8	Q9H221	673 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	INTS10	Q9NVR2	710 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	C2orf42	Q9NWW7	574 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	FBXO5	Q9UKT4	447 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	CCDC163	A0A0D9SF12	145 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	IGLON5	A6NGN9	336 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	OR51F1	A6NGY5	319 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	GOLGA6L10	A6NI86	522 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	C10orf142	B7Z368	130 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	GOLGA8K	D6RF30	607 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	GOLGA8T	H3BQL2	631 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	AGPS	O00116	658 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	PI15	O43692	258 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	RNGTT	O60942	597 aa	Known RBP	11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	PRAMEF1	O95521	474 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	S1PR4	O95977	384 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	PML	P29590	882 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	SPR	P35270	261 aa	Predicted RBP	11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	POLD2	P49005	469 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	TTPA	P49638	278 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	DNAJC3	Q13217	504 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	SGCG	Q13326	291 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	NFATC2	Q13469	925 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.84	□□□□□ -0.51	5e-7	■■■■■ 36.5
PRPF8-212	ENST00000575116	CHRNA6	Q15825	494 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	TYSND1	Q2T9J0	566 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	KRT71	Q3SY84	523 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	TMEM259	Q4ZIN3	620 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	RNF187	Q5TA31	235 aa	Predicted RBP	11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF470	Q6ECI4	717 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	ANO7	Q6IWH7	933 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	FAM151B	Q6UXP7	276 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	PACS1	Q6VY07	963 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	TAOK1	Q7L7X3	1001 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	STRA8	Q7Z7C7	330 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	TRIM69	Q86WT6	500 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	HORMAD1	Q86X24	394 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	AP2M1	Q96CW1	435 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	NUS1	Q96E22	293 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	PGM2	Q96G03	612 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	VPS35	Q96QK1	796 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	HHIP	Q96QV1	700 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	MCMBP	Q9BTE3	642 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	C1QTNF7	Q9BXJ2	289 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC17A9	Q9BYT1	436 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	ASB8	Q9H765	288 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	EURL	Q9NYK6	297 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	WSB2	Q9NYS7	404 aa	Predicted RBP	11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	IL1RAPL1	Q9NZN1	696 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	LGALS13	Q9UHV8	139 aa		11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZFR2	Q9UPR6	939 aa	Known RBP	11.84	□□□□□ -0.51
PRPF8-212	ENST00000575116	UNC80	Q8N2C7	3258 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	IQANK1	A0A1B0GTG1	560 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	TLDC2	A0PJX2	215 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116		K7ESF4	209 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	KRT37	O76014	449 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	KRT38	O76015	456 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	PDGFB	P01127	241 aa	Predicted RBP	11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	AHSG	P02765	367 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	MYZAP	P0CAP1	466 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	TEAD1	P28347	426 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	ATP5D	P30049	168 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	CD6	P30203	668 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	ACSL1	P33121	698 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	NUDT1	P36639	197 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	SLC1A2	P43004	574 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	PTGER3	P43115	390 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	CCR5	P51681	352 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	ADAR	P55265	1226 aa	Known RBP	11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	GPS2	Q13227	327 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	CTBP1	Q13363	440 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	SETMAR	Q53H47	684 aa	Predicted RBP	11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	RFLNA	Q6ZTI6	216 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	TAS2R42	Q7RTR8	314 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	BMP8A	Q7Z5Y6	402 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	FAM124A	Q86V42	546 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	DENND6A	Q8IWF6	608 aa		11.83	□□□□□ -0.52
PRPF8-212	ENST00000575116	OTUD6B	Q8N6M0	293 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms