RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 FAM45AQ8TCE6 357 aa10.89□□□□□ -0.67
PDXDC1-216ENST00000569715 SCYL1Q96KG9 808 aa10.89□□□□□ -0.67
PDXDC1-216ENST00000569715 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
PDXDC1-216ENST00000569715 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.89□□□□□ -0.67
PDXDC1-216ENST00000569715 LYPLA1O75608 230 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 KAT7O95251 611 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 CCDC166P0CW27 439 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 CPA3P15088 417 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TIMP2P16035 220 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ARRB2P32121 409 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 COL19A1Q14993 1142 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 CHRNA6Q15825 494 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 HNRNPA1L2Q32P51 320 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 BRAT1Q6PJG6 821 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 BOCQ9BWV1 1114 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 FAM50BQ9Y247 325 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 SLC30A1Q9Y6M5 507 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 LRRK1Q38SD2 2015 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 F5P12259 2224 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 A0A087X1B8 175 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TSPAN11A1L157 253 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 EBAG9O00559 213 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 KLF11O14901 512 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ITM2AO43736 263 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ECI2O75521 394 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 IL12RB1P42701 662 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 EIF4HQ15056 248 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 DBN1Q16643 649 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 EGFLAMQ63HQ2 1017 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 PARS2Q7L3T8 475 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TBC1D1Q86TI0 1168 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 PBXIP1Q96AQ6 731 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 SGF29Q96ES7 293 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TSPAN17Q96FV3 270 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TMEM245Q9H330 911 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 NPHS2Q9NP85 383 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 CD84Q9UIB8 345 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ITM2BQ9Y287 266 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 STARD13Q9Y3M8 1113 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TRIOO75962 3097 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 GLYATL1P3A0A0U1RQE8 302 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TARM1B6A8C7 271 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 PLK4O00444 970 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 NIPSNAP2O75323 286 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 SPAM1P38567 509 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TTPAP49638 278 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 NFATC2Q13469 925 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 HTR4Q13639 388 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ITGA9Q13797 1035 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ITPRIPL2Q3MIP1 535 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ZNF805Q5CZA5 627 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 SERPINA13PQ6UXR4 307 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 NAPRTQ6XQN6 538 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 SERPINA9Q86WD7 417 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 TCF12Q99081 682 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ABCG8Q9H221 673 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 ASB8Q9H765 288 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 CACNA2D2Q9NY47 1150 aa10.88□□□□□ -0.67
PDXDC1-216ENST00000569715 C16orf96A6NNT2 1141 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 UPK3BL1B0FP48 263 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 UPK3BL2E5RIL1 263 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 KPNA3O00505 521 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 SNNO75324 88 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 COL6A2P12110 1019 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 OCRLQ01968 901 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 RFWD2Q8NHY2 731 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 TSNARE1Q96NA8 513 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 PLXNA2O75051 1894 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 IQCF5A8MTL0 148 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 RHOBTB1O94844 696 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 SUOXP51687 545 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 IFT88Q13099 833 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 HSD11B1LQ7Z5J1 315 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 RMDN2Q96LZ7 410 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 GPR21Q99679 349 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 CORO1CQ9ULV4 474 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 NEMP2A6NFY4 417 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 SOX1O00570 391 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 LTA4HP09960 611 aaKnown RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 ZNF37AP17032 561 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 RALGDSQ12967 914 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 AAK1Q2M2I8 961 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 C6orf89Q6UWU4 347 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 SNX20Q7Z614 316 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 TTC7BQ86TV6 843 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 GIMAP7Q8NHV1 300 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 PPP1R14CQ8TAE6 165 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 SUSD6Q92537 303 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 EZH1Q92800 747 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 ARRDC3Q96B67 414 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 OSBPL1AQ9BXW6 950 aa10.87□□□□□ -0.67
PDXDC1-216ENST00000569715 P2RY12Q9H244 342 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms