RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PTGER4P35408 488 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 GPR1P46091 355 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 AP1S1P61966 158 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 PNOCQ13519 176 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 EXOC3L4Q17RC7 722 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 PYCR3Q53H96 274 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 TMCO4Q5TGY1 634 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 MED25Q71SY5 747 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 SLFN11Q7Z7L1 901 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 NLRP8Q86W28 1048 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 ZSWIM9Q86XI8 627 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 ZNF761Q86XN6 746 aaPredicted RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 TMEM102Q8N9M5 508 aaPredicted RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 Q8NA96 180 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMG1-216ENST00000569122 CT55Q8WUE5 264 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 TM9SF4Q92544 642 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 HDAC11Q96DB2 347 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 DTD2Q96FN9 168 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 ZDHHC12Q96GR4 267 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 CINPQ9BW66 212 aaPredicted RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 RMI1Q9H9A7 625 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 GPR83Q9NYM4 423 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 B4GALT6Q9UBX8 382 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 ZNHIT2Q9UHR6 403 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 FARSAQ9Y285 508 aaKnown RBP8.6□□□□□ -1.03
SMG1-216ENST00000569122 MED13Q9UHV7 2174 aa8.6□□□□□ -1.03
SMG1-216ENST00000569122 GTPBP10A4D1E9 387 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 A8MX80 341 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 FAM72CH0Y354 149 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 PRAMEF11O60813 436 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 SOCS5O75159 536 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 UBXN7O94888 489 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 HEXIM1O94992 359 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 PRF1P14222 555 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 CYP11B1P15538 503 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 DESP17661 470 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 GM2AP17900 193 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 PTPN9P43378 593 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 POLD2P49005 469 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 SCNN1BP51168 640 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 AIF1P55008 147 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 ZRSR2Q15696 482 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 CDO1Q16878 200 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 PRR30Q53SZ7 412 aaPredicted RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 FAM72AQ5TYM5 149 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 LYPLAL1Q5VWZ2 237 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 FAM72DQ6L9T8 149 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 TTI2Q6NXR4 508 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 DOK6Q6PKX4 331 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 ADAMTSL4Q6UY14 1074 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 GDF7Q7Z4P5 450 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 FAM72BQ86X60 149 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 GLIS1Q8NBF1 620 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 EXD1Q8NHP7 514 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 SMAD5Q99717 465 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 CRACR2AQ9BSW2 395 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 UNKQ9C0B0 810 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 NOL6Q9H6R4 1146 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 CPNE7Q9UBL6 633 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 RARRES3Q9UL19 164 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 B3GNT3Q9Y2A9 372 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 ST14Q9Y5Y6 855 aa8.59□□□□□ -1.03
SMG1-216ENST00000569122 COPG1Q9Y678 874 aaKnown RBP8.59□□□□□ -1.03
SMG1-216ENST00000569122 ITPR3Q14573 2671 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 A0A1B0GUH1 482 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 PRSS44E7EML9 344 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 FOXN3O00409 490 aaPredicted RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 TRAFD1O14545 582 aaPredicted RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 IPO13O94829 963 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 TMEM63AO94886 807 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 ASMTLO95671 621 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 IGHEP01854 428 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 KLK3P07288 261 aaPredicted RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 F3P13726 295 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CLCN1P35523 988 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 HSPA9P38646 679 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 ETV3P41162 512 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 SEPHS1P49903 392 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 ACY1Q03154 408 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CDK18Q07002 472 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CNGA3Q16281 694 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CCDC14Q49A88 953 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 VWA5B1Q5TIE3 1220 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CPZQ66K79 652 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 DENND2CQ68D51 928 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 KLHL10Q6JEL2 608 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 USP45Q70EL2 814 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 PRSS42Q7Z5A4 293 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 PHYKPLQ8IUZ5 450 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 TRIM48Q8IWZ4 208 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 RBM12BQ8IXT5 1001 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 RAVER1Q8IY67 606 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 FAM71AQ8IYT1 594 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 PELI3Q8N2H9 469 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms