RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 BRD9Q9H8M2 597 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 ECT2Q9H8V3 914 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 KCNK13Q9HB14 408 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 IGSF5Q9NSI5 407 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 PNPOQ9NVS9 261 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CD84Q9UIB8 345 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CRLS1Q9UJA2 301 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 VPS9D1Q9Y2B5 631 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 DOCK8Q8NF50 2099 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 PIKFYVEQ9Y2I7 2098 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 GLYATL1P3A0A0U1RQE8 302 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 TBC1D3BA6NDS4 549 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 MYO1CO00159 1063 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ZBTB14O43829 449 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 DLX3O60479 287 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CHRNGP07510 517 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CHRM1P11229 460 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 HLA-EP13747 358 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 BPIP17213 487 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ITGB6P18564 788 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ITGALP20701 1170 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 FDXRP22570 491 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ARRB2P32121 409 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 SCTRP47872 440 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CORO7P57737 925 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 POLR2LP62875 67 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 XIAPP98170 497 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CACNG1Q06432 222 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ARHGEF7Q14155 803 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 DBN1Q16643 649 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 FNDC3BQ53EP0 1204 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 NAIF1Q69YI7 327 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 CES5AQ6NT32 575 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 SYCE2Q6PIF2 218 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 PAQR3Q6TCH7 311 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CRTC1Q6UUV9 634 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 LCA5Q86VQ0 697 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 C10orf67Q8IYJ2 551 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 TMEM151AQ8N4L1 468 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 RDH11Q8TC12 318 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 NXPE3Q969Y0 559 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 TUBGCP5Q96RT8 1024 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 TCF12Q99081 682 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 GPR21Q99679 349 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CPEB1Q9BZB8 566 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 POMKQ9H5K3 350 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 IL26Q9NPH9 171 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ELOVL2Q9NXB9 296 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 GDE1Q9NZC3 331 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ZFP69BQ9UJL9 534 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CAPN7Q9Y6W3 813 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 NUP210Q8TEM1 1887 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 PRRT4C9JH25 899 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 KPNA3O00505 521 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 VPS26AO75436 327 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 PYGLP06737 847 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 RBP1P09455 135 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 PKMP14618 531 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 ZNF37AP17032 561 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 NFATC2Q13469 925 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ACAP2Q15057 778 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CHRNA6Q15825 494 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 PTRHD1Q6GMV3 140 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 ANKRD54Q6NXT1 300 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ATG14Q6ZNE5 492 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 TPRG1Q6ZUI0 275 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ALYREFQ86V81 257 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 MICALL1Q8N3F8 863 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CLDN19Q8N6F1 224 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ZNF781Q8N8C0 355 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 GBP7Q8N8V2 638 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 SIDT2Q8NBJ9 832 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 MRGPRX3Q96LB0 322 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ZNF641Q96N77 438 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 TTC1Q99614 292 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 KXD1Q9BQD3 176 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 SYTL2Q9HCH5 934 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 GALPQ9UBC7 116 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 B4GALT6Q9UBX8 382 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 TRMT6Q9UJA5 497 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 APPL1Q9UKG1 709 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CDH7Q9ULB5 785 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 CORO1CQ9ULV4 474 aaPredicted RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 FIS1Q9Y3D6 152 aa7.03□□□□□ -1.28
SMG1-215ENST00000568239 ATXN2Q99700 1313 aaKnown RBP7.03□□□□□ -1.28
SMG1-215ENST00000568239 H7C0S8 307 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 HOXC11O43248 304 aaPredicted RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 DIAPH2O60879 1101 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 CISD3P0C7P0 127 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 HOXB8P17481 243 aaPredicted RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 LHCGRP22888 699 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 TARSP26639 723 aaKnown RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 PPARGP37231 505 aaPredicted RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 SPAM1P38567 509 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 ARL13AQ5H913 290 aaPredicted RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 TECRLQ5HYJ1 363 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 VWA5B1Q5TIE3 1220 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 GRAMD4Q6IC98 578 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 VITQ6UXI7 678 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms