RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DLX2Q07687 328 aaPredicted RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 MESP2Q0VG99 397 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 OVGP1Q12889 678 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 PDAP1Q13442 181 aaKnown RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 ITGA9Q13797 1035 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 LYPLAL1Q5VWZ2 237 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 ZDHHC20Q5W0Z9 365 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 FAM151BQ6UXP7 276 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 PIM3Q86V86 326 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 PHTF2Q8N3S3 785 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 SPATA6LQ8N4H0 392 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 BIRC8Q96P09 236 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 KXD1Q9BQD3 176 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 DKK3Q9UBP4 350 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 USH1CQ9Y6N9 552 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 A8MX80 341 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 GAPDHSO14556 408 aaPredicted RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 ECI2O75521 394 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 RHOBTB1O94844 696 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 ESR1P03372 595 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 CYP2A6P11509 494 aaPredicted RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 PKMP14618 531 aaKnown RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 LHCGRP22888 699 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 SLC1A6P48664 564 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 TIAL1Q01085 375 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLN6-205ENST00000564846 PTSQ03393 145 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 NFATC2Q13469 925 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 GPR33Q49SQ1 333 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 PREPLQ4J6C6 727 aaPredicted RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 ZNF805Q5CZA5 627 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 PARM1Q6UWI2 310 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 TMEM207Q6UWW9 146 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 TRPM8Q7Z2W7 1104 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 ANKRD49Q8WVL7 239 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 C10orf82Q8WW14 230 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 THOC1Q96FV9 657 aaKnown RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 ASB8Q9H765 288 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 SYTL2Q9HCH5 934 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 CLDND1Q9NY35 253 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 B4GALT6Q9UBX8 382 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 PYGLP06737 847 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 CTSLP07711 333 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 CHRM1P11229 460 aaPredicted RBP19.46■□□□□ 0.71
CLN6-205ENST00000564846 ZNF37AP17032 561 aaPredicted RBP19.46■□□□□ 0.71
CLN6-205ENST00000564846 ZNF30P17039 623 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 OPRD1P41143 372 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 HNRNPA1L2Q32P51 320 aaKnown RBP19.46■□□□□ 0.71
CLN6-205ENST00000564846 FNDC3BQ53EP0 1204 aaKnown RBP19.46■□□□□ 0.71
CLN6-205ENST00000564846 LIPMQ5VYY2 423 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 CCDC121Q6ZUS5 278 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 UCMAQ8WVF2 138 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 PBXIP1Q96AQ6 731 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 GTSE1Q9NYZ3 720 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 PCDHB1Q9Y5F3 818 aa19.46■□□□□ 0.71
CLN6-205ENST00000564846 TRBV5-4A0A0C4DH59 114 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 EDDM13A0A1B0GTR0 161 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 TBC1D3BA6NDS4 549 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 UPK3BL1B0FP48 263 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 TMEM114B3SHH9 223 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 UPK3BL2E5RIL1 263 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 VPS26AO75436 327 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 ZNF7P17097 686 aaPredicted RBP19.45■□□□□ 0.7
CLN6-205ENST00000564846 ASPHQ12797 758 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 ARHGEF7Q14155 803 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 TECRLQ5HYJ1 363 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 EP400NLQ6ZTU2 488 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 SERPINA9Q86WD7 417 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 PPP4R1Q8TF05 950 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 CCT6BQ92526 530 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 KCNJ9Q92806 393 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 FGF14Q92915 247 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 PLEKHG4BQ96PX9 1271 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 TRMT61BQ9BVS5 477 aaKnown RBP19.45■□□□□ 0.7
CLN6-205ENST00000564846 C20orf27Q9GZN8 174 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 P2RY12Q9H244 342 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 KDM4CQ9H3R0 1056 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 MTG2Q9H4K7 406 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 MED16Q9Y2X0 877 aa19.45■□□□□ 0.7
CLN6-205ENST00000564846 PRMT5O14744 637 aaPredicted RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 OR1I1O60431 355 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 PRNPP04156 253 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 GDI1P31150 447 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 VIPR1P32241 457 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 ABCE1P61221 599 aaKnown RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 MTSS1LQ765P7 747 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 RBFAQ8N0V3 343 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 ZNF366Q8N895 744 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 CCDC126Q96EE4 140 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 MSLNLQ96KJ4 702 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 RMDN2Q96LZ7 410 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 NECTIN4Q96NY8 510 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 SIKE1Q9BRV8 207 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 POMKQ9H5K3 350 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 ZNF395Q9H8N7 513 aaPredicted RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 FAM50BQ9Y247 325 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 OAS3Q9Y6K5 1087 aaKnown RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 GOLGA8CPA6NN73 597 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 ITM2AO43736 263 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 TIMP2P16035 220 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms