RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FBXO6Q9NRD1 293 aaPredicted RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 RAD18Q9NS91 495 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 FBXL12Q9NXK8 326 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 SENP1Q9P0U3 644 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 DOCK9Q9BZ29 2069 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 A0A1W2PPM1 405 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 AGAP14A8MT82 685 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 NEMP1O14524 444 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 GM2AP17900 193 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ETV3P41162 512 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 CD151P48509 253 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 CREB5Q02930 508 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 NFATC2Q13469 925 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 CHRNA6Q15825 494 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ZNF789Q5FWF6 425 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 SNX20Q7Z614 316 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 SRRM1Q8IYB3 904 aaKnown RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 KRT222Q8N1A0 295 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 DTX3LQ8TDB6 740 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 COQ10AQ96MF6 247 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 INTS10Q9NVR2 710 aaKnown RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 MUTYHQ9UIF7 546 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ACTL7BQ9Y614 415 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 TRBV5-4A0A0C4DH59 114 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 TSPAN6O43657 245 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 NDUFV2P19404 249 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ITGALP20701 1170 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 PMLP29590 882 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ABCG1P45844 678 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 TTPAP49638 278 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ILF2Q12905 390 aaKnown RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 GAS6Q14393 721 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ACOX1Q15067 660 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 TTC31Q49AM3 519 aaPredicted RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 GPR33Q49SQ1 333 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 AARS2Q5JTZ9 985 aaKnown RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 CYP2U1Q7Z449 544 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 NRSN1Q8IZ57 195 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ZNF398Q8TD17 642 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ATXN7L3BQ96GX2 97 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 GPR22Q99680 433 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 FAM83DQ9H4H8 585 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 ASB8Q9H765 288 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
HERC1-205ENST00000559886 MTO1Q9Y2Z2 717 aaKnown RBP12.13□□□□□ -0.47
HERC1-205ENST00000559886 VCANP13611 3396 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 TCRBV21S2A2A0A5A6 115 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 WNT9AO14904 365 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 GPR39O43194 453 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 MMP20O60882 483 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 ATG13O75143 517 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 MT-ND3P03897 115 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 GABRG2P18507 467 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 DGKEP52429 567 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 HENMT1Q5T8I9 393 aaKnown RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 CERS6Q6ZMG9 384 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 SH2D5Q6ZV89 423 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 USP30Q70CQ3 517 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 DCLK2Q8N568 766 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.12□□□□□ -0.47
HERC1-205ENST00000559886 ISL2Q96A47 359 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 DTD2Q96FN9 168 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 SERAC1Q96JX3 654 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 OSBPL6Q9BZF3 934 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 TBC1D17Q9HA65 648 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 CD84Q9UIB8 345 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 FZD4Q9ULV1 537 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 PIKFYVEQ9Y2I7 2098 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 PFDN6O15212 129 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 PLRG1O43660 514 aaKnown RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 RFPL1O75677 317 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 C6P13671 934 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 CREB1P16220 341 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 UGT1A6P19224 532 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 UGT1A1P22309 533 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 UGT1A4P22310 534 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 UGT1A3P35503 534 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 UGT1A5P35504 534 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 CLCN5P51795 746 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 SFSWAPQ12872 951 aaKnown RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 RNF187Q5TA31 235 aaPredicted RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 KBTBD6Q86V97 674 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 CXorf40AQ8TE69 158 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 GANCQ8TET4 914 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 LPGAT1Q92604 370 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 SCAMP4Q969E2 229 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 ABCG8Q9H221 673 aa12.12□□□□□ -0.47
HERC1-205ENST00000559886 POLMQ9NP87 494 aaPredicted RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
HERC1-205ENST00000559886 NDUFS3O75489 264 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms