RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 HINT3Q9NQE9 182 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 SLC35C2Q9NQQ7 365 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 SIRT3Q9NTG7 399 aaPredicted RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 TXLNGQ9NUQ3 528 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 TAB2Q9NYJ8 693 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 PAM16Q9Y3D7 125 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 STON1Q9Y6Q2 735 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 B4DGG1 531 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 OGG1O15527 345 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 EPN2O95208 641 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 CYC1P08574 325 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 G6PDP11413 515 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 RASSF2P50749 326 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 TAS2R40P59535 323 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 ST3GAL1Q11201 340 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 AIMP1Q12904 312 aaKnown RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 MYBPC2Q14324 1141 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 PCLAFQ15004 111 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 CCDC96Q2M329 555 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 GGNBP1Q5YKI7 109 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 SHFQ7M4L6 423 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 ZNF367Q7RTV3 350 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 HACE1Q8IYU2 909 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 DCP1BQ8IZD4 617 aaKnown RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 MMP21Q8N119 569 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 POMGNT2Q8NAT1 580 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 C7orf57Q8NEG2 295 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 ZNF548Q8NEK5 533 aaPredicted RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 TRIB2Q92519 343 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 SLC25A28Q96A46 364 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 RADILQ96JH8 1075 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 NUDCD1Q96RS6 583 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 ABHD1Q96SE0 405 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 PAFAH2Q99487 392 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 BAG1Q99933 345 aaPredicted RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 FAM234AQ9H0X4 552 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 SIL1Q9H173 461 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 SLCO5A1Q9H2Y9 848 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 OSGEPL1Q9H4B0 414 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 KRCC1Q9NPI7 259 aaPredicted RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.41□□□□□ -1.54
VRK1-205ENST00000555402 OR6C3Q9NZP0 311 aa5.41□□□□□ -1.54
VRK1-205ENST00000555402 SEC63Q9UGP8 760 aaKnown RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 PPIEQ9UNP9 301 aaKnown RBP5.41□□□□□ -1.54
VRK1-205ENST00000555402 ATP2A1O14983 1001 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 MITFO75030 526 aaPredicted RBP5.4□□□□□ -1.54
VRK1-205ENST00000555402 ARSBP15848 533 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 EIF2S3P41091 472 aaKnown RBP5.4□□□□□ -1.54
VRK1-205ENST00000555402 METAP2P50579 478 aaKnown RBP eCLIP5.4□□□□□ -1.54
VRK1-205ENST00000555402 ZP1P60852 638 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 MRPS34P82930 218 aaKnown RBP5.4□□□□□ -1.54
VRK1-205ENST00000555402 TNFAIP1Q13829 316 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 KCNC3Q14003 757 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 PSMD6Q15008 389 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 PRTGQ2VWP7 1150 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 ZNF284Q2VY69 593 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 IGSF11Q5DX21 431 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 ANKRD54Q6NXT1 300 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 RPUSD3Q6P087 351 aaKnown RBP5.4□□□□□ -1.54
VRK1-205ENST00000555402 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 DPPA4Q7L190 304 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 DSELQ8IZU8 1212 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 SYT2Q8N9I0 419 aaPredicted RBP5.4□□□□□ -1.54
VRK1-205ENST00000555402 MCUQ8NE86 351 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 ACOX2Q99424 681 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 KIFC3Q9BVG8 833 aa5.4□□□□□ -1.54
VRK1-205ENST00000555402 TTC7AQ9ULT0 858 aaPredicted RBP5.4□□□□□ -1.54
VRK1-205ENST00000555402 TCF20Q9UGU0 1960 aaKnown RBP5.4□□□□□ -1.55
VRK1-205ENST00000555402 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 hCG_1809904A0A1W2PP81 198 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 A0A1W2PPE2 198 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 A0A1W2PR64 198 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 GLOD5A6NK44 160 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 I6L893 689 aaPredicted RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 AVILO75366 819 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 DAB1O75553 588 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 FTCDO95954 541 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 LIG4P49917 911 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 UBXN2AP68543 259 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 PPATQ06203 517 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 GRSF1Q12849 480 aaKnown RBP eCLIP5.39□□□□□ -1.55
VRK1-205ENST00000555402 CDC16Q13042 620 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 PNLIPRP3Q17RR3 467 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 EIF2S3LQ2VIR3 472 aaKnown RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 SOWAHCQ53LP3 525 aaPredicted RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 SPECC1Q5M775 1068 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 OTUD1Q5VV17 481 aaPredicted RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 ARMC3Q5W041 872 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 TMEM198Q66K66 360 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 PLEKHA7Q6IQ23 1121 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 ZNF549Q6P9A3 640 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 B3GNT6Q6ZMB0 384 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 Q6ZSV7 163 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 CACNA2D4Q7Z3S7 1137 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 ARID3BQ8IVW6 561 aaPredicted RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 SCYL3Q8IZE3 742 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 PPP1R13BQ96KQ4 1090 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 ESRP2Q9H6T0 727 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms