RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DAB2IPQ5VWQ8 1189 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF425Q6IV72 752 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 SLC30A6Q6NXT4 461 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 SCML4Q8N228 414 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 IL17RCQ8NAC3 791 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 OR14A16Q8NHC5 309 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 OIT3Q8WWZ8 545 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 LRRC59Q96AG4 307 aaKnown RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 SLC22A18Q96BI1 424 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 MRPL1Q9BYD6 325 aaKnown RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 KCNN2Q9H2S1 579 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 EPB41L5Q9HCM4 733 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 MMP25Q9NPA2 562 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 MTMR10Q9NXD2 777 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 ARHGEF38Q9NXL2 777 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 PSD3Q9NYI0 1048 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 CPSF2Q9P2I0 782 aaKnown RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 AGO1Q9UL18 857 aaKnown RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 ACSL5Q9ULC5 683 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 INSL5Q9Y5Q6 135 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 COL3A1P02461 1466 aaPredicted RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 M0QZ24 198 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 MAP2K7O14733 419 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 SERPINI2O75830 405 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 TOMM40O96008 361 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 CRYABP02511 175 aaKnown RBP5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 CDC25AP30304 524 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 FASLGP48023 281 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 HSD17B4P51659 736 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 STAT2P52630 851 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 PNLIPRP2P54317 469 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 PSMC6P62333 389 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 SREBF2Q12772 1141 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 TRAF2Q12933 501 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 GARNL3Q5VVW2 1013 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 FRG2Q64ET8 278 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 SLC36A4Q6YBV0 504 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 CLEC17AQ6ZS10 378 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 C1QL2Q7Z5L3 287 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 IRF2BP2Q7Z5L9 587 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 TECPR1Q7Z6L1 1165 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 SDCCAG8Q86SQ7 713 aaPredicted RBP5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 DNAAF5Q86Y56 855 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 EGLN2Q96KS0 407 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF778Q96MU6 729 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 FIZ1Q96SL8 496 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAD1Q99259 594 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 KIFC3Q9BVG8 833 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 TXLNGYQ9BZA5 131 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 PIGMQ9H3S5 423 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 SLC35C2Q9NQQ7 365 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 MARCH4Q9P2E8 410 aaPredicted RBP5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 SLC9A2Q9UBY0 812 aa5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 PTRH2Q9Y3E5 179 aaKnown RBP5.43□□□□□ -1.54
CKS1BP1-201ENST00000555221 GOLGA6L9A6NEM1 432 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 SMAD9O15198 467 aaKnown RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 PAPSS1O43252 624 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 EGFP01133 1207 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 DNTTP04053 509 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 TUBBP07437 444 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 ADRB2P07550 413 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 SCP2P22307 547 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 MSH2P43246 934 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 ABATP80404 500 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 ECT2LQ008S8 904 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 FOXM1Q08050 763 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 GRSF1Q12849 480 aaKnown RBP eCLIP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 MAD2L1Q13257 205 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 AMZ1Q400G9 498 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 TDRD12Q587J7 1177 aaKnown RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 BMP2KLQ5H9B9 411 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 DCST1Q5T197 706 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 KRT79Q5XKE5 535 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 C8orf82Q6P1X6 216 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 KBTBD6Q86V97 674 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF575Q86XF7 245 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 LINC00346Q8IVM7 164 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 SCYL3Q8IZE3 742 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 PRR26Q8N8Z3 221 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 SYT2Q8N9I0 419 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 APPL2Q8NEU8 664 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 OR1J2Q8NGS2 313 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 MAGEC3Q8TD91 643 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 SLC25A33Q9BSK2 321 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 APOL6Q9BWW8 343 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 TMEM39BQ9GZU3 492 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 WSB2Q9NYS7 404 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 STK39Q9UEW8 545 aa5.42□□□□□ -1.54
CKS1BP1-201ENST00000555221 SPINT2O43291 252 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 NDUFS7O75251 213 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 AVILO75366 819 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAGE7O76087 117 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 ICAM1P05362 532 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 HOXC6P09630 235 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAGE12FP0CL80 117 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAGE12GP0CL81 117 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAGE12IP0CL82 117 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 BDKRB2P30411 391 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 HNRNPH2P55795 449 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms