RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SLC4A1P02730 911 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 UGT2B4P06133 528 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 FMO4P31512 558 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 VIPR1P32241 457 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 IL2P60568 153 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 XIAPP98170 497 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 IRF9Q00978 393 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 PRKAA1Q13131 559 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 CSHL1Q14406 222 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 TBCCQ15814 346 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
PTCH1-215ENST00000547672 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
PTCH1-215ENST00000547672 SYCE2Q6PIF2 218 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 CRTC1Q6UUV9 634 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 CENPLQ8N0S6 344 aaPredicted RBP13.38□□□□□ -0.27
PTCH1-215ENST00000547672 OR6Y1Q8NGX8 325 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 STAG3L4Q8TBR4 150 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 STON2Q8WXE9 905 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 FAR2Q96K12 515 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 MRGPRX3Q96LB0 322 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 KLHL32Q96NJ5 620 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 GPR78Q96P69 363 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 NDNQ99608 321 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 MECRQ9BV79 373 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 DERL2Q9GZP9 239 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 DRC3Q9H069 523 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 ASB8Q9H765 288 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 BPIFA1Q9NP55 256 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 KCTD5Q9NXV2 234 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 CRLS1Q9UJA2 301 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 MYLKQ15746 1914 aa13.38□□□□□ -0.27
PTCH1-215ENST00000547672 TMEM265A0A087WTH1 108 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 A0A0G2JND7 137 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TBC1D3BA6NDS4 549 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 UPK3BL1B0FP48 263 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TARM1B6A8C7 271 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 UPK3BL2E5RIL1 263 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 PSMD11O00231 422 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 QSOX1O00391 747 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CCL22O00626 93 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 KPNA5O15131 536 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CLDN7O95471 211 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 PRAMEF1O95521 474 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 ALPIP09923 528 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 LAMP2P13473 410 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CHRM3P20309 590 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 GRIA2P42262 883 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 RGS4P49798 205 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CDKN2DP55273 166 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CORO7P57737 925 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 ELP6Q0PNE2 266 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 NFATC2Q13469 925 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 PEX6Q13608 980 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 PTPRCAPQ14761 206 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CDKN3Q16667 212 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 ITPRIPL2Q3MIP1 535 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TTLL9Q3SXZ7 439 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 ZNF789Q5FWF6 425 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 PTRHD1Q6GMV3 140 aaKnown RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TANGO2Q6ICL3 276 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 NRSN1Q8IZ57 195 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 ACVR1CQ8NER5 493 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 GRIN3AQ8TCU5 1115 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 C10orf82Q8WW14 230 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 SUSD6Q92537 303 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 INPP5DQ92835 1189 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 PDLIM5Q96HC4 596 aaKnown RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 OLFM1Q99784 485 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 IL26Q9NPH9 171 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 DYRK4Q9NR20 520 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 SAR1AQ9NR31 198 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 IGSF5Q9NSI5 407 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TXLNGQ9NUQ3 528 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 RRP15Q9Y3B9 282 aaKnown RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 RAP2CQ9Y3L5 183 aa13.37□□□□□ -0.27
PTCH1-215ENST00000547672 OAS3Q9Y6K5 1087 aaKnown RBP13.37□□□□□ -0.27
PTCH1-215ENST00000547672 TRBV5-4A0A0C4DH59 114 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 EPOPA6NHQ4 379 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 CFAP99D6REC4 459 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 MAGEC1O60732 1142 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 DNAJC6O75061 913 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 LEFTY1O75610 366 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
PTCH1-215ENST00000547672 APODP05090 189 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 ARSAP15289 507 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 BPIP17213 487 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 NSG1P42857 185 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 DCDC1P59894 354 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 PFKPQ01813 784 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 RCN2Q14257 317 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 ELAVL3Q14576 367 aaKnown RBP13.36□□□□□ -0.27
PTCH1-215ENST00000547672 HNRNPA1L2Q32P51 320 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms