RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 METTL21CQ5VZV1 264 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 SLC27A1Q6PCB7 646 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 CAMK1DQ8IU85 385 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 TRPV1Q8NER1 839 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 TEKT5Q96M29 485 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 FEM1AQ9BSK4 669 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 ZNF696Q9H7X3 374 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 RNF186Q9NXI6 227 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 IFT80Q9P2H3 777 aaPredicted RBP14.62□□□□□ -0.07
HOXC11-202ENST00000546378 MYO10Q9HD67 2058 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 MLNP12872 115 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
HOXC11-202ENST00000546378 VARSP26640 1264 aaKnown RBP14.62□□□□□ -0.07
HOXC11-202ENST00000546378 XIAPP98170 497 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 IL5RAQ01344 420 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 CAP1Q01518 475 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 SP3Q02447 781 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 SLC10A7Q0GE19 358 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 NOTUMQ6P988 496 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 TAS2R42Q7RTR8 314 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 ABHD8Q96I13 439 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 EML4Q9HC35 981 aaKnown RBP14.62□□□□□ -0.07
HOXC11-202ENST00000546378 TBC1D13Q9NVG8 400 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 UXTQ9UBK9 157 aaPredicted RBP14.62□□□□□ -0.07
HOXC11-202ENST00000546378 RNF112Q9ULX5 631 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 PRG3Q9Y2Y8 225 aaPredicted RBP14.62□□□□□ -0.07
HOXC11-202ENST00000546378 DNAH14Q0VDD8 3507 aa14.62□□□□□ -0.07
HOXC11-202ENST00000546378 RBM47A0AV96 593 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 BTN3A1O00481 513 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 TLR5O60602 858 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 IL1BP01584 269 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 HOXA11P31270 313 aaPredicted RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 HSPA13P48723 471 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 EFEMP1Q12805 493 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 FRG1Q14331 258 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PYCR3Q53H96 274 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PCID2Q5JVF3 399 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 C14orf80Q86SX3 495 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 ITIH5Q86UX2 942 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 EPHX4Q8IUS5 362 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 DUSP16Q9BY84 665 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CNPP09543 421 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 LTA4HP09960 611 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 ZNF37AP17032 561 aaPredicted RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CCND3P30281 292 aaPredicted RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 DAB2P98082 770 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CLCQ05315 142 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 NOGQ13253 232 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 TSNQ15631 228 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 UAP1L1Q3KQV9 507 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PAGE3Q5JUK9 113 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 NANOGP8Q6NSW7 305 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PIWIL4Q7Z3Z4 852 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 SLC15A3Q8IY34 581 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PSMA8Q8TAA3 256 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 DLG3Q92796 817 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CHID1Q9BWS9 393 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 BBS2Q9BXC9 721 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CRTAC1Q9NQ79 661 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 DUS2Q9NX74 493 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 GALPQ9UBC7 116 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 UBQLN1Q9UMX0 589 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 VWA7Q9Y334 891 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 C17orf102A2RUQ5 167 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 RRN3P2A6NIE6 340 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 HACD1B0YJ81 288 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PAGE1O75459 146 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 LRATO95237 230 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PAMP19021 973 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CDKN1CP49918 316 aaPredicted RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 DDR2Q16832 855 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 AP5B1Q2VPB7 878 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 OTUD1Q5VV17 481 aaPredicted RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 FUNDC1Q8IVP5 155 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 SLC22A15Q8IZD6 547 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PNPT1Q8TCS8 783 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 RAET1EQ8TD07 263 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 PTERQ96BW5 349 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 SMOQ99835 787 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 MRPL57Q9BQC6 102 aaKnown RBP14.61□□□□□ -0.07
HOXC11-202ENST00000546378 RMI1Q9H9A7 625 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 TIMMDC1Q9NPL8 285 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 MKS1Q9NXB0 559 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 CD274Q9NZQ7 290 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 KIAA1257Q9ULG3 409 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 DNAJC15Q9Y5T4 150 aa14.61□□□□□ -0.07
HOXC11-202ENST00000546378 NUMA1Q14980 2115 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 LDLRP01130 860 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 FYNP06241 537 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 CDH3P22223 829 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 SLC7A1P30825 629 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 SH3BGRP55822 239 aaPredicted RBP14.6□□□□□ -0.07
HOXC11-202ENST00000546378 ELMSAN1Q6PJG2 1045 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 ANGPTL8Q6UXH0 198 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 NEK10Q6ZWH5 1172 aa14.6□□□□□ -0.07
HOXC11-202ENST00000546378 RAB44Q7Z6P3 723 aaPredicted RBP14.6□□□□□ -0.07
HOXC11-202ENST00000546378 LSRQ86X29 649 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms