RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 INTUQ9ULD6 942 aa15.55■□□□□ 0.08
VPS33A-206ENST00000542310 ATXN7L1Q9ULK2 861 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-206ENST00000542310 C3orf70A6NLC5 250 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 K7ENP7 123 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 PPP1R12AO14974 1030 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 KALRNO60229 2985 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 ECEL1O95672 775 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 MMP2P08253 660 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 SLC5A2P31639 672 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 ACTR1BP42025 376 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 SLC1A1P43005 524 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 ACTR1AP61163 376 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 C19orf57Q0VDD7 668 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 TCEAL1Q15170 157 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 PYCR3Q53H96 274 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 HENMT1Q5T8I9 393 aaKnown RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 ARHGAP40Q5TG30 622 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 INO80CQ6PI98 192 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 DOK6Q6PKX4 331 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 RFLNAQ6ZTI6 216 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 GALNT13Q8IUC8 556 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 CNGA4Q8IV77 575 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 NAGSQ8N159 534 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 PTCD2Q8WV60 388 aaKnown RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 SCAMP4Q969E2 229 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 CCDC42Q96M95 316 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 OLFM3Q96PB7 478 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 DPYSL5Q9BPU6 564 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 ADGRE3Q9BY15 652 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 BRD8Q9H0E9 1235 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 SUDS3Q9H7L9 328 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 PKD2L2Q9NZM6 624 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 AKAP7Q9P0M2 348 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 NFKBIL1Q9UBC1 381 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-206ENST00000542310 PISDQ9UG56 409 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 ST14Q9Y5Y6 855 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 COL6A6A6NMZ7 2263 aa15.54■□□□□ 0.08
VPS33A-206ENST00000542310 C1orf232A0A0U1RR37 186 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 APOL1O14791 398 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 HGSO14964 777 aaPredicted RBP15.53■□□□□ 0.08
VPS33A-206ENST00000542310 C1QL1O75973 258 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 CLDN7O95471 211 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 LIPCP11150 499 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 CD82P27701 267 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 CD86P42081 329 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 FASLGP48023 281 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 POLD2P49005 469 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 SPINT3P49223 89 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 DCDC1P59894 354 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 ZBTB17Q13105 803 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 BIRC2Q13490 618 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 TRA2AQ13595 282 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS33A-206ENST00000542310 PDK1Q15118 436 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 QPCTQ16769 361 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 PCSK4Q6UW60 755 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 PIM3Q86V86 326 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 CCHCR1Q8TD31 782 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 SMIM14Q96QK8 99 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 MLPHQ9BV36 600 aaPredicted RBP15.53■□□□□ 0.08
VPS33A-206ENST00000542310 RIOK2Q9BVS4 552 aaKnown RBP15.53■□□□□ 0.08
VPS33A-206ENST00000542310 TSPY26PQ9H489 355 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 RMI1Q9H9A7 625 aa15.53■□□□□ 0.08
VPS33A-206ENST00000542310 NHEJ1Q9H9Q4 299 aaPredicted RBP15.53■□□□□ 0.08
VPS33A-206ENST00000542310 DDX56Q9NY93 547 aaKnown RBP15.53■□□□□ 0.08
VPS33A-206ENST00000542310 A0A0U1RQS6 177 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 ANKRD66B4E2M5 251 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 KCNK1O00180 336 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 DNAJC6O75061 913 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 JCHAINP01591 159 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 KRT1P04264 644 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 HGFP14210 728 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 GPLD1P80108 840 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 SQSTM1Q13501 440 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 PHF19Q5T6S3 580 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 TMPRSS9Q7Z410 1059 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 TRIM74Q86UV6 250 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 JAMLQ86YT9 394 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 RHOT1Q8IXI2 618 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.52■□□□□ 0.08
VPS33A-206ENST00000542310 CNTD1Q8N815 330 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 TTC9Q92623 222 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 CCNL2Q96S94 520 aaPredicted RBP15.52■□□□□ 0.08
VPS33A-206ENST00000542310 AGAP2Q99490 1192 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 CHP1Q99653 195 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 MAK16Q9BXY0 300 aaKnown RBP15.52■□□□□ 0.08
VPS33A-206ENST00000542310 SPTLC3Q9NUV7 552 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 TMEM98Q9Y2Y6 226 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 HEY1Q9Y5J3 304 aa15.52■□□□□ 0.08
VPS33A-206ENST00000542310 GPR89AB7ZAQ6 455 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 B4GAT1O43505 415 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 GPR89BP0CG08 455 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 ALDH4A1P30038 563 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 OR1D5P58170 312 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 AP1B1Q10567 949 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 TAF1BQ53T94 588 aaPredicted RBP15.51■□□□□ 0.07
VPS33A-206ENST00000542310 ODF2Q5BJF6 829 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 PDPK2PQ6A1A2 396 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 CCDC81Q6ZN84 652 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 BZW1Q7L1Q6 419 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms