RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 OR1A2Q9Y585 309 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 DGKBQ9Y6T7 804 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 ZNF292O60281 2723 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 MROH6A6NGR9 719 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 AURKAO14965 403 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 RASGRP1O95267 797 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 BPIP17213 487 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 PEX6Q13608 980 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 KCNJ11Q14654 390 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 LAYNQ6UX15 382 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 PRUNE1Q86TP1 453 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 OR52K1Q8NGK4 314 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 RMI1Q9H9A7 625 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 DNAJC28Q9NX36 388 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 KLQ9UEF7 1012 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 ARL5AQ9Y689 179 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 CSNK1G3Q9Y6M4 447 aa18.67■□□□□ 0.58
VPS33A-205ENST00000541169 TP53BP1Q12888 1972 aaPredicted RBP18.67■□□□□ 0.58
VPS33A-205ENST00000541169 GLYATL1P3A0A0U1RQE8 302 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 MAGEB16A2A368 324 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 C4orf47A7E2U8 309 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 H7C0S8 307 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 FLRT2O43155 660 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 LDB2O43679 373 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 SOD1P00441 154 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 SLC4A1P02730 911 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 PSMA3P25788 255 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 PTGIRP43119 386 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 VPS41P49754 854 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 ZNF140P52738 457 aaPredicted RBP18.66■□□□□ 0.58
VPS33A-205ENST00000541169 PCID2Q5JVF3 399 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 DBX2Q6ZNG2 339 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 JAMLQ86YT9 394 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 PHYKPLQ8IUZ5 450 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 PPHLN1Q8NEY8 458 aaKnown RBP18.66■□□□□ 0.58
VPS33A-205ENST00000541169 OR4K2Q8NGD2 314 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 CPT1BQ92523 772 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 COX14Q96I36 57 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 KRT12Q99456 494 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 ZCCHC2Q9C0B9 1178 aaKnown RBP18.66■□□□□ 0.58
VPS33A-205ENST00000541169 IL26Q9NPH9 171 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 NLE1Q9NVX2 485 aaPredicted RBP18.66■□□□□ 0.58
VPS33A-205ENST00000541169 SPASTQ9UBP0 616 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 GVINP1Q7Z2Y8 2422 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 ADAMTS9Q9P2N4 1935 aa18.66■□□□□ 0.58
VPS33A-205ENST00000541169 PTPRZ1P23471 2315 aaPredicted RBP18.65■□□□□ 0.58
VPS33A-205ENST00000541169 SCN8AQ9UQD0 1980 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 A0A0U1RQS6 177 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 K7ESM1 405 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 SLC30A4O14863 429 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 TNFP01375 233 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 HK3P52790 923 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 SRP54P61011 504 aaKnown RBP18.65■□□□□ 0.58
VPS33A-205ENST00000541169 POU6F1Q14863 301 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 GPR33Q49SQ1 333 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 ENPP7Q6UWV6 458 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 FSTL5Q8N475 847 aaPredicted RBP18.65■□□□□ 0.58
VPS33A-205ENST00000541169 HEXDCQ8WVB3 486 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 GLYATL1Q969I3 302 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 ULK4Q96C45 1275 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 RTKNQ9BST9 563 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 SMOXQ9NWM0 555 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 SLC17A4Q9Y2C5 497 aa18.65■□□□□ 0.58
VPS33A-205ENST00000541169 FNDC3AQ9Y2H6 1198 aaKnown RBP18.65■□□□□ 0.58
VPS33A-205ENST00000541169 GOLGA8CPA6NN73 597 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 DNALI1O14645 258 aaPredicted RBP18.64■□□□□ 0.57
VPS33A-205ENST00000541169 VEGFDO43915 354 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 GDF9O60383 454 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 SLC25A14O95258 325 aaPredicted RBP18.64■□□□□ 0.57
VPS33A-205ENST00000541169 IVLP07476 585 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 JUNDP17535 347 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 TPH1P17752 444 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 EPHA8P29322 1005 aaPredicted RBP18.64■□□□□ 0.57
VPS33A-205ENST00000541169 GRK6P43250 576 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 OLIG2Q13516 323 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 SEPT6Q14141 434 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 MORF4L2Q15014 288 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 ELOCQ15369 112 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 LDLRAP1Q5SW96 308 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 LVRNQ6Q4G3 990 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 RFLNAQ6ZTI6 216 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 NAT8LQ8N9F0 302 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 SAP25Q8TEE9 199 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 SCARF2Q96GP6 870 aaPredicted RBP18.64■□□□□ 0.57
VPS33A-205ENST00000541169 SNF8Q96H20 258 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 SGSM3Q96HU1 749 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 DUSP23Q9BVJ7 150 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 RAB17Q9H0T7 212 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 MRM3Q9HC36 420 aaKnown RBP18.64■□□□□ 0.57
VPS33A-205ENST00000541169 TRIM39Q9HCM9 518 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 BPIFA1Q9NP55 256 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 FSCN3Q9NQT6 498 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 RXFP3Q9NSD7 469 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 MRFAP1Q9Y605 127 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 ZNF106Q9H2Y7 1883 aaKnown RBP18.64■□□□□ 0.57
VPS33A-205ENST00000541169 FRYLO94915 3013 aa18.64■□□□□ 0.57
VPS33A-205ENST00000541169 TMEM131Q92545 1883 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 PRSS38A1L453 326 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 PIAS2O75928 621 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms