RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 POMPQ9Y244 141 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 FAM25EA8MYX2 175 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 ERN1O75460 977 aaKnown RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 USP4Q13107 963 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 SLC1A5Q15758 541 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 AMHR2Q16671 573 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 APTXQ7Z2E3 356 aaKnown RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 LRTOMTQ8WZ04 291 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 RHBDF1Q96CC6 855 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 UNKQ9C0B0 810 aaKnown RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 EGFL7Q9UHF1 273 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 POLR3HQ9Y535 204 aaPredicted RBP6.9□□□□□ -1.3
SORT1-209ENST00000538502 PCDHGB1Q9Y5G3 927 aa6.9□□□□□ -1.3
SORT1-209ENST00000538502 PSIP1O75475 530 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 EPORP19235 508 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 EEFSECP57772 596 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 LAPTM5Q13571 262 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 ZNF181Q2M3W8 571 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 SAPCD2Q86UD0 394 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 PDSS2Q86YH6 399 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 TTC29Q8NA56 475 aaPredicted RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 AIFM2Q9BRQ8 373 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 GTPBP2Q9BX10 602 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 IGSF9Q9P2J2 1179 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 DERAQ9Y315 318 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 NFAT5O94916 1531 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A9O60656 530 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 CCNB2O95067 398 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A6P19224 532 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 TNNI3P19429 210 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 CD72P21854 359 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A1P22309 533 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A4P22310 534 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 ACSL1P33121 698 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A3P35503 534 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 CAP2P40123 477 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 GPD2P43304 727 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 TGFB2P61812 414 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 RGS1Q08116 209 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 NPNTQ6UXI9 565 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 ISLR2Q6UXK2 745 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 PPCDCQ96CD2 204 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 MECRQ9BV79 373 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 CST11Q9H112 138 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 IRF2BPLQ9H1B7 796 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 SLC6A15Q9H2J7 730 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A7Q9HAW7 530 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A10Q9HAW8 530 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 UGT1A8Q9HAW9 530 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 MTMR10Q9NXD2 777 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 ADAMTS13Q76LX8 1427 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 PRODHO43272 600 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 PRAMEF1O95521 474 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 FGBP02675 491 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 ZNF806P0C7X5 589 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 C7P10643 843 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 S100A2P29034 98 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 GNPDA1P46926 289 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 ALDH7A1P49419 539 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 POU5F1Q01860 360 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 BOP1Q14137 746 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 CPTPQ5TA50 214 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 QSOX2Q6ZRP7 698 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 BANPQ8N9N5 519 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 TNFAIP8L1Q8WVP5 186 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 FAM136AQ96C01 138 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 MTFMTQ96DP5 389 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 CPB2Q96IY4 423 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 SCGB3A2Q96PL1 93 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 COQ10BQ9H8M1 238 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 C3orf14Q9HBI5 128 aa6.9□□□□□ -1.31
SORT1-209ENST00000538502 EIF3KQ9UBQ5 218 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 RPL36Q9Y3U8 105 aaKnown RBP6.9□□□□□ -1.31
SORT1-209ENST00000538502 EML1O00423 815 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 PITPNM1O00562 1244 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 GLDCP23378 1020 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 MPSTP25325 297 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 ALDH4A1P30038 563 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 LIMK2P53671 638 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 ZNF45Q02386 682 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 BRMS1LQ5PSV4 323 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 ZNF517Q6ZMY9 492 aaPredicted RBP6.89□□□□□ -1.31
SORT1-209ENST00000538502 STRADAQ7RTN6 431 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 RBFAQ8N0V3 343 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 OR4L1Q8NH43 312 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 TWIST2Q8WVJ9 160 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 AKAP1Q92667 903 aaKnown RBP eCLIP6.89□□□□□ -1.311e-6■□□□□ 10.3
SORT1-209ENST00000538502 RTFDC1Q9BY42 306 aaPredicted RBP6.89□□□□□ -1.31
SORT1-209ENST00000538502 PRDM5Q9NQX1 630 aaPredicted RBP6.89□□□□□ -1.31
SORT1-209ENST00000538502 CALML5Q9NZT1 146 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 BTRCQ9Y297 605 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 PPP2R3BQ9Y5P8 575 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 LACTBL1A8MY62 500 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 B3GAT3O94766 335 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 CETPP11597 493 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 PRPS2P11908 318 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 CYP4B1P13584 511 aa6.89□□□□□ -1.31
SORT1-209ENST00000538502 PTGIRP43119 386 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms