RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	UNC5D	Q6UXZ4	953 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	BTN2A1	Q7KYR7	527 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	MEPCE	Q7L2J0	689 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	TRAPPC11	Q7Z392	1133 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	SLC9B2	Q86UD5	537 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	C10orf53	Q8N6V4	93 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	FIBIN	Q8TAL6	211 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	KCNJ9	Q92806	393 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	TMCO6	Q96DC7	493 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	NAA11	Q9BSU3	229 aa	Predicted RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	SYT17	Q9BSW7	474 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	NPL	Q9BXD5	320 aa	Predicted RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	HEMGN	Q9BXL5	484 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	CHMP4B	Q9H444	224 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	TASP1	Q9H6P5	420 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PFDN4	Q9NQP4	134 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	RRP7BP	Q9NSQ0	103 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	HPF1	Q9NWY4	346 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	IL1RAPL1	Q9NZN1	696 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	NCKIPSD	Q9NZQ3	722 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PEMT	Q9UBM1	199 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	HDAC6	Q9UBN7	1215 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	UBA2	Q9UBT2	640 aa	Predicted RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	KL	Q9UEF7	1012 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	FBXL17	Q9UF56	701 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	SEC63	Q9UGP8	760 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	BLOC1S6	Q9UL45	172 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	NENF	Q9UMX5	172 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PPIE	Q9UNP9	301 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	MTMR6	Q9Y217	621 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	EFCAB5	A4FU69	1503 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	RGS12	O14924	1447 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	FAM135B	Q49AJ0	1406 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979		A4D1N5	150 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	TRIM64C	A6NLI5	447 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	PAPSS1	O43252	624 aa	Predicted RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	STX6	O43752	255 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	TACC1	O75410	805 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	RECQL5	O94762	991 aa	Predicted RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ALDOA	P04075	364 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	GALT	P07902	379 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	CBSL	P0DN79	551 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	FDPS	P14324	419 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	CBS	P35520	551 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	CDKN2A	P42771	156 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	RPS6KA3	P51812	740 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	EFNA5	P52803	228 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	EVC	P57679	992 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	NANOS2	P60321	138 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	YWHAH	Q04917	246 aa	Predicted RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ACTN3	Q08043	901 aa	Predicted RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ALCAM	Q13740	583 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	PTGR1	Q14914	329 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	MORF4L2	Q15014	288 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	KIAA1755	Q5JYT7	1200 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	TTC39A	Q5SRH9	613 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	C6orf10	Q5SRN2	563 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	HMBOX1	Q6NT76	420 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	C17orf99	Q6UX52	265 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	MINDY1	Q8N5J2	469 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	SETD6	Q8TBK2	473 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	UTP15	Q8TED0	518 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	MRPS27	Q92552	414 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	MR1	Q95460	341 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	TSGA13	Q96PP4	275 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ATP6V0B	Q99437	205 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	SRSF8	Q9BRL6	282 aa	Known RBP	4.75	□□□□□ -1.65
ATM-223	ENST00000533979	HIPK2	Q9H2X6	1198 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	TXNRD2	Q9NNW7	524 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	C20orf141	Q9NUB4	165 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	CACNG4	Q9UBN1	327 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	TUBE1	Q9UJT0	475 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ATP6V0A2	Q9Y487	856 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ARHGEF12	Q9NZN5	1544 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979	ATP10A	O60312	1499 aa		4.75	□□□□□ -1.65
ATM-223	ENST00000533979		A0A1W2PRG0	241 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	TTC36	A6NLP5	189 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	EIF3CL	B5ME19	914 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	SCAMP1	O15126	338 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	ADAMDEC1	O15204	470 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	KIN	O60870	393 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	KERA	O60938	352 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	SEC31A	O94979	1220 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	CAMTA2	O94983	1202 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	NFATC1	O95644	943 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	CYP4B1	P13584	511 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	PTPN2	P17706	415 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	PRPH2	P23942	346 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	CCR10	P46092	362 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	NPY4R	P50391	375 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	SHC2	P98077	582 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	ALKBH1	Q13686	389 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	SLC18A3	Q16572	532 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	GXYLT1	Q4G148	440 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	C10orf76	Q5T2E6	689 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	FAM171A1	Q5VUB5	890 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	GALNT17	Q6IS24	598 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	ABRAXAS1	Q6UWZ7	409 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms