RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 MYCLP1P12525 358 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-206ENST00000531480 MAGEA3P43357 314 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 VPS41P49754 854 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 ARHGAP8P85298 464 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 CDK3Q00526 305 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 ACVR1Q04771 509 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 EIF2B5Q13144 721 aaKnown RBP14.39□□□□□ -0.11
CPSF1-206ENST00000531480 SLC14A1Q13336 389 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PDE1CQ14123 709 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PTK2BQ14289 1009 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PPP1R7Q15435 360 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 KANSL1Q7Z3B3 1105 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 DGLUCYQ7Z3D6 616 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 CAND1Q86VP6 1230 aaKnown RBP14.39□□□□□ -0.11
CPSF1-206ENST00000531480 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PARGQ86W56 976 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 HEATR4Q86WZ0 1026 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 TRAM1L1Q8N609 369 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-206ENST00000531480 TBATAQ96M53 351 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 VPS35Q96QK1 796 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 KRT12Q99456 494 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 LGR4Q9BXB1 951 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-206ENST00000531480 GAREM1Q9H706 876 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 WDR26Q9H7D7 661 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 L2HGDHQ9H9P8 463 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 TMEM9BQ9NQ34 198 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PKP3Q9Y446 797 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 OR1A2Q9Y585 309 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 KCTD3Q9Y597 815 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PCDHGB2Q9Y5G2 931 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 ARID1BQ8NFD5 2236 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CTAGE15A4D2H0 777 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 DNALI1O14645 258 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 TTI1O43156 1089 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CSF2P04141 144 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CTAGE8P0CG41 777 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 NME1P15531 152 aaKnown RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 TPH1P17752 444 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 ADRA1DP25100 572 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 SPAM1P38567 509 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 GPR1P46091 355 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 NPY2RP49146 381 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 LMAN1P49257 510 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 XIAPP98170 497 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CBLBQ13191 982 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 LAMB3Q13751 1172 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 AASDHQ4L235 1098 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CERCAMQ5T4B2 595 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 RAET1GQ6H3X3 334 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 PPP1R21Q6ZMI0 780 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CTAGE6Q86UF2 777 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 CTAGE4Q8IX94 777 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 DNAAF3Q8N9W5 541 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 OR4K2Q8NGD2 314 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 STYXQ8WUJ0 223 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 HIC2Q96JB3 615 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 WDR92Q96MX6 357 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 IL21RQ9HBE5 538 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 NLE1Q9NVX2 485 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 SMOXQ9NWM0 555 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 KLF15Q9UIH9 416 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 TMPRSS11EQ9UL52 423 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 SLC17A4Q9Y2C5 497 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 FNDC3AQ9Y2H6 1198 aaKnown RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 DGKBQ9Y6T7 804 aa14.38□□□□□ -0.11
CPSF1-206ENST00000531480 TDRD6O60522 2096 aaKnown RBP14.38□□□□□ -0.11
CPSF1-206ENST00000531480 COL5A1P20908 1838 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-206ENST00000531480 MED19A0JLT2 244 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-206ENST00000531480 HEATR9A2RTY3 570 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 TMEM202A6NGA9 273 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 GOLGA8CPA6NN73 597 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 SMAPO00193 183 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 CACNB4O00305 520 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-206ENST00000531480 TM4SF5O14894 197 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 STX7O15400 261 aaKnown RBP14.37□□□□□ -0.11
CPSF1-206ENST00000531480 CEACAM5P06731 702 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 HTR1BP28222 390 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 ADCY8P40145 1251 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 HADHAP40939 763 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 ARRB1P49407 418 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-206ENST00000531480 THOP1P52888 689 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 SARNPP82979 210 aaKnown RBP14.37□□□□□ -0.11
CPSF1-206ENST00000531480 C2orf54Q08AI8 447 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 PTPRCAPQ14761 206 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 POU6F1Q14863 301 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 STPG1Q5TH74 334 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 MAATS1Q7Z4T9 603 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 PCGF5Q86SE9 256 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 OR13C4Q8NGS5 318 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 OR13J1Q8NGT2 312 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 OR2I1PQ8NGU4 316 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 SAP25Q8TEE9 199 aa14.37□□□□□ -0.11
CPSF1-206ENST00000531480 PTCD2Q8WV60 388 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms