RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TEX44Q53QW1 395 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 PHF19Q5T6S3 580 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 ITPRIPL1Q6GPH6 555 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 DARS2Q6PI48 645 aaKnown RBP9.04□□□□□ -0.96
CMTM1-210ENST00000528441 LVRNQ6Q4G3 990 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 NYAP1Q6ZVC0 841 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
CMTM1-210ENST00000528441 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 JAMLQ86YT9 394 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 NRSN1Q8IZ57 195 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 PELI3Q8N2H9 469 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 EXD1Q8NHP7 514 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 SPATA22Q8NHS9 363 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 CCL4L1Q8NHW4 92 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 ARRDC2Q8TBH0 407 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 BLOC1S5Q8TDH9 187 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 KRT35Q92764 455 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 FATE1Q969F0 183 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 VOPP1Q96AW1 172 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 AHCYL2Q96HN2 611 aaKnown RBP9.04□□□□□ -0.96
CMTM1-210ENST00000528441 HIC2Q96JB3 615 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 TTC25Q96NG3 672 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 MCCC1Q96RQ3 725 aaPredicted RBP9.04□□□□□ -0.96
CMTM1-210ENST00000528441 BOCQ9BWV1 1114 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 SLC25A51Q9H1U9 297 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 OSGEPL1Q9H4B0 414 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 RAD18Q9NS91 495 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 AKAP7Q9P0M2 348 aaPredicted RBP9.04□□□□□ -0.96
CMTM1-210ENST00000528441 IMPACTQ9P2X3 320 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 FAM153AQ9UHL3 310 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 PNMA8BQ9ULN7 279 aaPredicted RBP9.04□□□□□ -0.96
CMTM1-210ENST00000528441 ZNF711Q9Y462 761 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 DGKBQ9Y6T7 804 aa9.04□□□□□ -0.96
CMTM1-210ENST00000528441 CACNA1BQ00975 2339 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 ARID1BQ8NFD5 2236 aaPredicted RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 TRBV23OR9-2A0A075B6M9 112 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 C3orf70A6NLC5 250 aaPredicted RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 HACD1B0YJ81 288 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 ANKRD66B4E2M5 251 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 FZD6O60353 706 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 TJP3O95049 919 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 ATP1A1P05023 1023 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 HOXC4P09017 264 aaPredicted RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 JMJD7P0C870 316 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 ALDH4A1P30038 563 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 DEKP35659 375 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 MAPK9P45984 424 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 HADHBP55084 474 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 MAZP56270 477 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 EIF3EP60228 445 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 PTSQ03393 145 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 PPP2R5EQ16537 467 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 INSCQ1MX18 579 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 C14orf28Q4W4Y0 310 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 SEL1L2Q5TEA6 688 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 BROXQ5VW32 411 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 RAD9BQ6WBX8 426 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 GLT6D1Q7Z4J2 308 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 GAS2L3Q86XJ1 694 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 PHYKPLQ8IUZ5 450 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 CCNJLQ8IV13 435 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 LSMEM2Q8N112 164 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 HTR3CQ8WXA8 447 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 IMP4Q96G21 291 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 ATXN7L3BQ96GX2 97 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 OLFM3Q96PB7 478 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 SRPK1Q96SB4 655 aaKnown RBP9.03□□□□□ -0.96
CMTM1-210ENST00000528441 FAM118BQ9BPY3 351 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 TEX101Q9BY14 249 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 OSBPL8Q9BZF1 889 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 NRSN2Q9GZP1 204 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 BPIFA1Q9NP55 256 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 ARFGAP3Q9NP61 516 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 THSD1Q9NS62 852 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 TAAR2Q9P1P5 351 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 LRIT1Q9P2V4 623 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 SATB2Q9UPW6 733 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 LRP4O75096 1905 aa9.03□□□□□ -0.96
CMTM1-210ENST00000528441 TMX2-CTNND1H3BSU7 103 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 APOC4-APOC2K7ER74 178 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 KCNN4O15554 427 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TCEA3O75764 348 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 SLC25A14O95258 325 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 LCA5LO95447 670 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 NDST3O95803 873 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 FTCDO95954 541 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 APOC2P02655 101 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CEACAM5P06731 702 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 IVLP07476 585 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ACP5P13686 325 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 GLB1P16278 677 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 GM2AP17900 193 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 RBL1P28749 1068 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CTNNA1P35221 906 aaKnown RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TRIM23P36406 574 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ADCY8P40145 1251 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms