RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 MYL6P60660 151 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 CAP1Q01518 475 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 RHDQ02161 417 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PCDH1Q08174 1060 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 FSTL1Q12841 308 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KLF10Q13118 480 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TRIM25Q14258 630 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 ZNF267Q14586 743 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 ZNF273Q14593 569 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KCNJ11Q14654 390 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ANGPT1Q15389 498 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TAB1Q15750 504 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 NPY5RQ15761 445 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PSMD5Q16401 504 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PARP15Q460N3 678 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 GTDC1Q4AE62 458 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 STXBP5Q5T5C0 1151 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 LGSNQ5TDP6 509 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 FAXCQ5TGI0 409 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 MROH9Q5TGP6 573 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ATF7IP2Q5U623 682 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 STEAP3Q658P3 488 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 HMBOX1Q6NT76 420 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 FAM180BQ6P0A1 224 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TMEM81Q6P7N7 255 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 DRICH1Q6PGQ1 229 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 SLC16A12Q6ZSM3 486 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 MFSD6Q6ZSS7 791 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 GPRIN3Q6ZVF9 776 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 HTR3DQ70Z44 454 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 BTN2A1Q7KYR7 527 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ERMP1Q7Z2K6 904 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ZBTB46Q86UZ6 589 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 JAZF1Q86VZ6 243 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ZSWIM9Q86XI8 627 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 P3H2Q8IVL5 708 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 IFNL3Q8IZI9 196 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TXNDC5Q8NBS9 432 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 MCUQ8NE86 351 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ZSWIM2Q8NEG5 633 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 BPIFB6Q8NFQ5 453 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 OR52H1Q8NGJ2 320 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SPATA18Q8TC71 538 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TAS1R2Q8TE23 839 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 DEDD2Q8WXF8 326 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 AKAP1Q92667 903 aaKnown RBP eCLIP5.8□□□□□ -1.48
CD44-225ENST00000527326 MUL1Q969V5 352 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 RAD51AP1Q96B01 352 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 NXNL1Q96CM4 212 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ZNF512BQ96KM6 892 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 FAM167AQ96KS9 214 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 HSFY1Q96LI6 401 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TSGA13Q96PP4 275 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 GMLQ99445 158 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SEC22CQ9BRL7 303 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TTYH2Q9BSA4 534 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 CNPY3Q9BT09 278 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SYT11Q9BT88 431 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 FUNDC2Q9BWH2 189 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 GTPBP2Q9BX10 602 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 BRIP1Q9BX63 1249 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TEKT3Q9BXF9 490 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SLC19A3Q9BZV2 496 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 UCK2Q9BZX2 261 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 LHPPQ9H008 270 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 MRPL18Q9H0U6 180 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 THAP2Q9H0W7 228 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 MMP27Q9H306 513 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 CAPN10Q9HC96 672 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ZFP14Q9HCL3 533 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 XPNPEP1Q9NQW7 623 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SH3GLB2Q9NR46 395 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PLSCR3Q9NRY6 295 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 TOPORSQ9NS56 1045 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 PIH1D1Q9NWS0 290 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 WARS2Q9UGM6 360 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 SFMBT1Q9UHJ3 866 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 KLHL21Q9UJP4 597 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 AGO1Q9UL18 857 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 SPATA2Q9UM82 520 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 COPS3Q9UNS2 423 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 COG5Q9UP83 839 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ACOT9Q9Y305 439 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ASB4Q9Y574 426 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 ACTL7AQ9Y615 435 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 CDY2AQ9Y6F7 541 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 SNCAIPQ9Y6H5 919 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 DGKBQ9Y6T7 804 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 BRWD3Q6RI45 1802 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 MYH14Q7Z406 1995 aaKnown RBP5.8□□□□□ -1.48
CD44-225ENST00000527326 MYH3P11055 1940 aa5.8□□□□□ -1.48
CD44-225ENST00000527326 PNMA8CA0A1B0GUJ8 204 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 A0A1B0GWJ7 208 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 A0A1W2PRQ8 180 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TCRBV3S1A0A5B6 114 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 RGSL1A5PLK6 1076 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TUBAL3A6NHL2 446 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 DBX1A6NMT0 343 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms